Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1724 ATGGCTACTCCTTCCCTGCACCAATTTGTTTCTTCCGTCCTCATCCTCTTCCTTCTCCTCCTGGCCACAGGGATGGGGCCAAGAATGGTGGCAGAAGCAAGGACATGCGAGTCAAAGAGCCAACGCTTCAGAGGAGTATGCGTGAGGTCCTCTAACTGTGGCTCTGTCTGCCAGTCCGAGGGCTTCTCCGACGGCCACTGCCGGGGCGTCCGCCGCCGTTGCTTCTGCACCAAACATTGCCAATGA 246 0.5772 MATPSLHQFVSSVLILFLLLLATGMGPRMVAEARTCESKSQRFRGVCVRSSNCGSVCQSEGFSDGHCRGVRRRCFCTKHCQ 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1724 81 CDD Knot1 45 77 IPR003614 GO:0006952
Lele50g1724 81 PANTHER DEFENSIN-LIKE PROTEIN 1 12 80 - -
Lele50g1724 81 PRINTS Purothionin signature 65 79 IPR008176 GO:0006952
Lele50g1724 81 PRINTS Purothionin signature 35 50 IPR008176 GO:0006952
Lele50g1724 81 SMART gth_4 35 80 IPR003614 GO:0006952
Lele50g1724 81 SUPERFAMILY Scorpion toxin-like 34 80 IPR036574 -
Lele50g1724 81 ProSitePatterns Gamma-thionins family signature. 34 57 IPR008176 GO:0006952
Lele50g1724 81 Pfam Gamma-thionin family 34 80 - -
Lele50g1724 81 Gene3D - 34 80 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1724 Lele-ChrLele50 22030499 22030885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1724 8 80 Plant Defensins Gene Families AT2G02100 61.644 1.57e-30 100