Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1700 ATGCCTCTCCACTCACGCGGAGTTCCCCCTGTAAACTGCCTGCAAAATGTCTCTCGAGCCACTTGTTCTAAAACCACCAATGAATCAAATCAGGTATTACTCATGCATGGATTTGTTCTGTGCACCACCATTTTCTCCTTACCTGAACTCATTGATTCATTCCTATCTTTTTCTCTTCCTCTCCTCCGTCGTCCCCTGTCTCCCACATTTCGATCCTCTTCCCCTAAACAAGCGCTTTTCTCTTGCAGGCGGATTTTCCCGGGAAATGATATGGGGAAACCCCAACTCGGTTTTGGGGTTTCTTTCCTAATTTATCATCTGATTTTGGTGTTGTCTGTGGCGATTTCGGCTGTGTCTCAGAATGATGCAGCGGTGATGAACATTCTTAAGGCGGCAATCAATGCCCCACCTACTCTCAGATGGACGGTAACTGACGTCTGCAAATGGCAACGAGTGGATTGTAATTCTGAAAAACGAGTCATTGCCATTCAGATCGGGAACTTGAAATTGCAAGGTTTGCTTCCGAAAGAACTTGAGAATCTCTCGGAGTTGCAACGATTTGAATGCCCACAGAACGGTCTCACAGGTCCAGTTCCATATCTATCCAAGACACTACACAGACTTGTGATCCGAGATAACAAGTTCAGCTCCATCCCTAATGATTTCTTCAAGGGAATGGCAATGTTACAAGAAGTAAGAGTTGGAAATAACCCATTTTCGCAATGGTCTATTATGAATAGTCTTAAGGATTGCGTAGCACTCCAGACATTCGTAGCAACAAATGCAAATTTGGTTGGAACGATCCCAGATTTTTTAGGTACCATGCCAGGTTTAGTTTCTTTTCTCCTCAGTTCTAATAGTCTTGAGGGTGGCTTGCCTGCAAGCTTTGCAAAGAGTTCAATCGAGGAACTTTGGTTGAATGCACAAAATGGTAACAATAAACTTAATGGCTCACTTAATGTGTTGCAGAACATGACATCCTTAAAAGTAGTTTGGCTACACGATAATTCATTTACTGGTAAAATACCAGACATGTCAAACCATGATCAGTTGTCTGATGTGAGTTTAAGGGACAACCAATTGGCTTGTGTCGTCCCACCATCTCTTATGGCTCTTCCAAGTTTAAAGGTTGTGAATTTGACTAACAATTTCCTTCAAGGGCCAATTCCAACATTTAAATCAGGTGTGGTTGTTGATACGTCTGGGATTAATAGGTTTTGCACAAACTTCCCAAATCAGCCATGTAGTCCTCTTGTGAATGCTTTAATATCTGTTGTTGAATCCTTAGGATGTCCTGTGAAATTGGCTGATAATTGGAAGGGCAATGATCCTTGCAATGGTAGTTGGACAGGAATAGTGTGCGCTGGGGGTAACATTTCAATTATCAATTTTCAGAACATGGGCTTGTCAGGCACTATTTCTCCTAATTTTGCCTTACTTACCTCTGTCTCAGAATTGCTTCTTTCTAATAATTCACTCACGGGTCCTATACCAAATGAGCTCACTACAATGCCCAATCTAGAAAAGCTTGATGTTTCAAACAACAATTTAGGAGGTTTTGTGCCATCTTTTCGTCAACCAGGTATAGATGTTAAAACAAATGGGAATCTTGATCTTGGAAAACCTCTTAAATCACCTAGCTCATCAGATTCTGGAGGTGATGGTGTCCATGAGAATAACAAACTCGCTGTATTCATTGTTGCCATTGTGGTTGGCTTAGTGATTTTATTTGCTATAGCAACTCTGGTGTTCCTTAAGTCTCTTAAAAAACGTAATTATTCAGGCAAGTTTGGAGGTCTAATAGCGAAGCTAATAGGTCCTCGTGATGATGGATCTGGGAAAGGTATGAAAATTAATGTTTCAGGTGTTGGTACTCGTAGTCATGGTGATATCCAAGGTATGGTAATTCCAATTCAAGTTCTGAGAGAAGTCACTGGCAATTTCAACAATGCAAACATACTAGGAAAGGGTGGTTTTGGCACTGTGTACAAAGGTGAACTGCAAGATGGAACAAAGATGGCAGTGAAAAGAATGGAATCAGGATTGTTGATGGAGAAGGGACTGAGACCACTTAGTAAGCATCTGTTTGACTGGAAAGTGAGTGGATTGGAACCTCTGGATTGGAGAAGAAGACTAAGCATTGCCTTGGATGTAGCTAGAGTCCGGCTCGCTCCCGAAGGAAGACATTCAGTCGAAACTAGGCTTGCTGGAACTTTCGGGTATCTTGCACCTGAGTATGCAGCAACTGGGCGAGTTACTACAAAGGTTGATGTGTACAGTTTTGGAGTGGTGGTGATGGAGATGATAACAGGGAGGAGAGTGCTTGACGATAGCCTACCGGAGGAAGACTTCCACCTGGTGACGCGGTTCCGGCGAATGATGCAGAACAGTGCCGACAATGACTGGCTTCGAAAGCTCATAGATCCTACCATTGATGCTGATGATGAAGTAACCATGTCGAGCATTAGGACTGTGTCGGAGTTGGCCGGACATTGCTGTGCAAATGAGCCTCATCAACGTCCCGACATGAGCCATGTAGTGAATGTACTATTGCCTCTGGTTCAGGCATGGAAGCCCCAAGAATCTGGTGATGATGGCGGCAAGTATGGCCTTGACTTGGAAATGAGTTTGCCTCAAGCACTCAGAAAATGGCAGTCTTTGGAAGGAAATAGCACAATGGTGGAAGGATCATATGCTTCTCAATCATTTGTCACAAAATAA 2721 0.4304 MPLHSRGVPPVNCLQNVSRATCSKTTNESNQVLLMHGFVLCTTIFSLPELIDSFLSFSLPLLRRPLSPTFRSSSPKQALFSCRRIFPGNDMGKPQLGFGVSFLIYHLILVLSVAISAVSQNDAAVMNILKAAINAPPTLRWTVTDVCKWQRVDCNSEKRVIAIQIGNLKLQGLLPKELENLSELQRFECPQNGLTGPVPYLSKTLHRLVIRDNKFSSIPNDFFKGMAMLQEVRVGNNPFSQWSIMNSLKDCVALQTFVATNANLVGTIPDFLGTMPGLVSFLLSSNSLEGGLPASFAKSSIEELWLNAQNGNNKLNGSLNVLQNMTSLKVVWLHDNSFTGKIPDMSNHDQLSDVSLRDNQLACVVPPSLMALPSLKVVNLTNNFLQGPIPTFKSGVVVDTSGINRFCTNFPNQPCSPLVNALISVVESLGCPVKLADNWKGNDPCNGSWTGIVCAGGNISIINFQNMGLSGTISPNFALLTSVSELLLSNNSLTGPIPNELTTMPNLEKLDVSNNNLGGFVPSFRQPGIDVKTNGNLDLGKPLKSPSSSDSGGDGVHENNKLAVFIVAIVVGLVILFAIATLVFLKSLKKRNYSGKFGGLIAKLIGPRDDGSGKGMKINVSGVGTRSHGDIQGMVIPIQVLREVTGNFNNANILGKGGFGTVYKGELQDGTKMAVKRMESGLLMEKGLRPLSKHLFDWKVSGLEPLDWRRRLSIALDVARVRLAPEGRHSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVVMEMITGRRVLDDSLPEEDFHLVTRFRRMMQNSADNDWLRKLIDPTIDADDEVTMSSIRTVSELAGHCCANEPHQRPDMSHVVNVLLPLVQAWKPQESGDDGGKYGLDLEMSLPQALRKWQSLEGNSTMVEGSYASQSFVTK 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1700 906 ProSiteProfiles Protein kinase domain profile. 528 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1700 906 Gene3D Ribonuclease Inhibitor 418 541 IPR032675 -
Lele50g1700 906 Pfam Leucine Rich Repeat 506 523 IPR001611 GO:0005515
Lele50g1700 906 Pfam Protein kinase domain 732 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1700 906 PANTHER OSJNBA0070M12.3 PROTEIN 106 689 - -
Lele50g1700 906 MobiDBLite consensus disorder prediction 533 554 - -
Lele50g1700 906 FunFam Receptor-like kinase TMK4 120 412 - -
Lele50g1700 906 SUPERFAMILY Protein kinase-like (PK-like) 637 860 IPR011009 -
Lele50g1700 906 SUPERFAMILY L domain-like 125 393 - -
Lele50g1700 906 Gene3D Transferase(Phosphotransferase) domain 1 716 854 - -
Lele50g1700 906 MobiDBLite consensus disorder prediction 540 554 - -
Lele50g1700 906 FunFam Leucine-rich repeat receptor-like kinase 417 542 - -
Lele50g1700 906 SUPERFAMILY L domain-like 420 523 - -
Lele50g1700 906 Pfam Leucine rich repeat N-terminal domain 421 454 IPR013210 -
Lele50g1700 906 Pfam Leucine rich repeat N-terminal domain 120 155 IPR013210 -
Lele50g1700 906 Gene3D Ribonuclease Inhibitor 119 410 IPR032675 -
Lele50g1700 906 Gene3D Phosphorylase Kinase; domain 1 620 697 - -
Lele50g1700 906 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1700 Lele-ChrLele50 21847510 21851013 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1700 160 850 Receptor kinase-like Gene Family AT5G07280 26.277 2.58e-41 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele50g1700 Pkinase 8.5e-11 CL0016