Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1683 ATGCAGCAATCTGCAGATTATCAACGTCGACTTCATCTTCCTCCTCCTCCTCCTCCAGATTTCTTCTCTCAGTATTTCTCTCTGGGCTTGAAGGTCCTCTTAGTTGGCATCGATAATGCCACCCAAAATAGTATTCAGAAACAGCTTCGACCACCTCATTACTACATCACTCATTGTCACACTGGTTCTTCTGCCTTACAACACTTACTTGACAAAGATTCTTCCTTTGACTTGATTCTCAGTGATGTCTTCTTGCAAGACATGGATGGTTATCAATTCGTCAGACGCCAACGCTCCAACACAAATATTCCTCACGTTTTGATAAGTGGACTTGAAAGATCAAGTAGCAGCATAAAGACAGCATACAAAAGTGGTGTGTGTTATGTGTTGTGGAAGCCAGTGAGTGATAGTGAGCTAAAAAATTTATGGCAACATGTTTGTAGGAGGAGGGAACAAGGTGATGACTTATTCAATGGGAACGTGGACGACAATCATAATCATCAGCAGCAGCAGAATCAATTATTAGTACGACAAAATAATCCTCATCCTCATCATCAGGATGAGGGTTGTTCTTCTTCTCTTGTTTCCAGAGACAAAAGTCCCCAGGTGGAGGACGACAGGGAGTTTTTGAATAAACATCATGGTGATCAACAACGTTCTTCCAAAAAACGACGGGTCGTCTGGTCCGGTGACCTCCATCAGCGTTTTCTTGATGCCGTGAATTATCTTGGCGGCGTAGAAAGTCGTCAGGTGGTTCCAATGGCAATGGTACCTTCATCAGCTTTTGCAGGAAATGGAAGCAATATGCAGCAGCAACAGATAGCTCAAAACCTGATCACTTCTGGTGTGCACCAGCAGAAACTAGAGCAAAACCTAGCTTTAGCTTCTTGCCATGGAAACAAGATGAAGCAATTTGATCAAAACCTAGGTTCTGCTTCTTACCATGGAGGCAATAGGCAGCATCATCAAGATCAAAACCTAGCTTCAGGTACTTCCCATGGAAGTAATATGCAAATAAATCAAAACCTTACTTCTGGTATCCATCATCTAGAGTCAAGTCAAATCGTAGCTTCAAGTTCTTGCCATGGAGGCAATATGCAGCATGTTGATCAAAACCTTGCTTCAGGTTCTTGCCCTGGCAACAATATGCAGCATGTTGACCAAAACCTAGCTTCAGGTTCTTGTTATGTTACTACTACTATAGGCGGTAATAATAATGATGGAAGCATCAAGTCAGAAGCAGCACCTGTAATTAGGGATCGTGATGATGATGATGATGATTTTTTTGATAATTTTGATGATAACTTGGACGAGGCAATTCCTAACTTACTCATGGCTGATCCGCATCATACCCAATACCAGTTGCATGATTAA 1374 0.4207 MQQSADYQRRLHLPPPPPPDFFSQYFSLGLKVLLVGIDNATQNSIQKQLRPPHYYITHCHTGSSALQHLLDKDSSFDLILSDVFLQDMDGYQFVRRQRSNTNIPHVLISGLERSSSSIKTAYKSGVCYVLWKPVSDSELKNLWQHVCRRREQGDDLFNGNVDDNHNHQQQQNQLLVRQNNPHPHHQDEGCSSSLVSRDKSPQVEDDREFLNKHHGDQQRSSKKRRVVWSGDLHQRFLDAVNYLGGVESRQVVPMAMVPSSAFAGNGSNMQQQQIAQNLITSGVHQQKLEQNLALASCHGNKMKQFDQNLGSASYHGGNRQHHQDQNLASGTSHGSNMQINQNLTSGIHHLESSQIVASSSCHGGNMQHVDQNLASGSCPGNNMQHVDQNLASGSCYVTTTIGGNNNDGSIKSEAAPVIRDRDDDDDDFFDNFDDNLDEAIPNLLMADPHHTQYQLHD 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1683 457 SUPERFAMILY CheY-like 30 158 IPR011006 -
Lele50g1683 457 MobiDBLite consensus disorder prediction 179 198 - -
Lele50g1683 457 Gene3D - 26 157 - -
Lele50g1683 457 MobiDBLite consensus disorder prediction 308 339 - -
Lele50g1683 457 ProSiteProfiles Response regulatory domain profile. 31 147 IPR001789 GO:0000160
Lele50g1683 457 SMART REC_2 30 143 IPR001789 GO:0000160
Lele50g1683 457 MobiDBLite consensus disorder prediction 199 224 - -
Lele50g1683 457 Pfam Response regulator receiver domain 33 141 IPR001789 GO:0000160
Lele50g1683 457 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 315 IPR045279 GO:0009736
Lele50g1683 457 Gene3D - 220 292 - -
Lele50g1683 457 MobiDBLite consensus disorder prediction 179 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1683 Lele-ChrLele50 21767620 21770977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1683 26 317 Response Regulator Gene Family AT2G25180 26.910 3.29e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele50g1683 Response_reg 5.6e-11 CL0304