Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1682 ATGGTTGTTCAAGAGAAGGAATTAATTAGATTGAAACGTGAGGCAAAGCTCAAAGGTGGATTCTATGTTGATCCAGAAGCTAAACTTTTATTTATTATTCGCATCCGTGGTATTAATGCCATGCATCCAAAGACTAGAAAGATCTTGCAGCTCCTGCGATTGAGACAGATACCCAAATCTGAAGAGTGTTGGAGAACTTATTTACAAGAGGGGTTATGCCCTAATGGTAAGGTCGACAAGCAGAGAATTGCTTTAACTGACAACTCCATTGTTGAGCAGGCACTGGGCAAACACGGAATCATTTGCACTGAGGATCTTATCCATGAGATCATGACTGTTGGGCCCCACTTTAAGGAGGCCAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTCCTTTGGGTGGACTCAAGAAGAAGAGAAACCACTATGTTGAAGGAGGCGATGCTGGCAACAGGGAGAATTACATAAATGAGCTTATCAGAAGAATGAACTAA 495 0.4222 MVVQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIPKSEECWRTYLQEGLCPNGKVDKQRIALTDNSIVEQALGKHGIICTEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1682 164 PANTHER 60S RIBOSOMAL PROTEIN L7 4 57 IPR039699 -
Lele50g1682 164 Pfam Ribosomal protein L30p/L7e 30 57 IPR016082 -
Lele50g1682 164 Gene3D - 29 61 IPR036919 -
Lele50g1682 164 Gene3D - 105 164 IPR036919 -
Lele50g1682 164 SUPERFAMILY Ribosomal protein L30p/L7e 29 164 IPR036919 -
Lele50g1682 164 FunFam Uncharacterized protein 91 164 - -
Lele50g1682 164 CDD Ribosomal_L7_archeal_euk 29 164 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1682 Lele-ChrLele50 21761979 21764383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1682 4 164 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 71.892 1.43e-87 254