LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele50g1666	ATGAATTCTGAGAATCTTGTCATTAGCGATTTAGAAGACCCAGGTGAAGATTTCTTTAGAATAGTTGATGATCTGCCATCATCATCGCCCCCCATTGAGTTTCATGAAGCTCTGGAAATTTATCTGAGTGGCTCTAATAGTGAAGGAGATGAGTTTGCAAGAATCCATACACCAGATTCAAGTCAACATCACCATATCCAACTGGTTAATGACACATCAATTGAAGATTATCCCATAGAAGTTATCTTTCCAATGGATGAAGGTGTTCCACCATCTCCCCCAAATAAGAGTTATTGTGAATGTTTTGCCAATGGGAAATTATGTGGCCAAGATTGTAGCTGCGAAGGTTGCTTCAACACATTGGAACATGAAACCACAAATATCAGGGAGACAAGGAACAAGATCCTAAGTCATAATCCATCGGCATCTGCTGGTGGATTCCACACACTCACTCATAAAAGCTTATACGGATATGCAAATCAGAAGGCAATGGATGGAGCATCTGGCCCGATGGTTCAATTGCTGGTCGTCCAAATAGCTGCCATGGCTCAAACGAGAGTGAGTCCATTTGTTGCATCCGGTAACATCCCTTTATCGATGGCCCTCCAAATTGCCTCCATAGCTCAACCGCTCGTGAATCCATTTGCTAAATCAAACAACATCCCTCAAATGGCTACAATGGCTCAAATGCAAGTAAATCAATTTACTCCAACAAGCAACATCATCCCCCCATCGTCGACTGTCCAAAGGTTAGCCATAGCTCAACTAGGAGCGAATCCATTTGCTCCAGCAAGCAACATCATCCCTCCACCGTCAGCCGTCCAAAAGGACGCCATGCCTCAATTGCAAGTGAATCCCTTTGCTCCATCAAGTGATGGCCTTCCATAG	888	0.4381	MNSENLVISDLEDPGEDFFRIVDDLPSSSPPIEFHEALEIYLSGSNSEGDEFARIHTPDSSQHHHIQLVNDTSIEDYPIEVIFPMDEGVPPSPPNKSYCECFANGKLCGQDCSCEGCFNTLEHETTNIRETRNKILSHNPSASAGGFHTLTHKSLYGYANQKAMDGASGPMVQLLVVQIAAMAQTRVSPFVASGNIPLSMALQIASIAQPLVNPFAKSNNIPQMATMAQMQVNQFTPTSNIIPPSSTVQRLAIAQLGANPFAPASNIIPPPSAVQKDAMPQLQVNPFAPSSDGLP	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele50g1666	295	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	96	120	IPR005172	-
	Lele50g1666	295	PANTHER	PROTEIN TESMIN/TSO1-LIKE CXC 2	96	142	IPR044522	GO:0003700
	Lele50g1666	295	SMART	CXC_2	95	123	IPR033467	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele50g1666	Lele-ChrLele50	21673453	21676974	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele50g1666	96	144	CPP Transcription Factor Family	AT3G22780	53.061	9.37e-07	48.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	CPP	Lele50g1666		TCR	2.9e-07	No_clan