Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1663 ATGATGATTGTGGAGGGATTAGTTGGTGTGAATTGTTTTTTGTTTGGGAGCCGCACAAACATCAACAACTGGTCCTCTGTTTCTGCCTCATGGGCTAGTTTTCTCAGGCATCGTGCTAAAGAAACTATGATCAAATCGAAAAGCTTTCTTCAAAGCATTATGAAACATCTCAAATTCGGTTCAAGCAGAGAGAGACAGAACGAAGACGAAGTTCAGCGGATTGCCGCCAGGGAGCAGAAGGTCTTTTCCTACGAAACCTTAGCTTCGGCGACGAAGAATTTCAATCCTCATCACAAGCTTGGCGAGGGAGGATTCGGACCAGTTTACAAGGGGAAGCTAGAAGATGGAAGAGAGATAGCAGTGAAGAAGCTATCGGTGAGATCAAACCAAGGGAAGAAGGAGTTCATAAATGAGGCAAAATTGTTGGCGCGTGTGCAACACCGCAATGTTGTGAATCTGTTGGGCTATTGTGTGTATGGTTCTGAGAAGCTTCTTGTTTATGAGTATGTTCCTCATGAGAGCCTTGACAAAATTCTCTTCAAATCAGATAGGAGAAAAGTGCTCGACTGGGAAAAGAGGTTTGGAATAATAATGGGAATAGCTAGAGGATTGCTTTATCTTCACGAAGATTCGCATGACTGCATAATTCACAGAGACATAAAAGCTAGCAATGTTCTTCTTGATGATAAATGGAATCCTAAGATCGCAGATTTCGGCATGGCTCGTCTCTTCCCTGAAGATGAAACCCATGTCAAAACTCGTGTCGCTGGAACCAATGGATATATGGCTCCAGAATATATAATGTACGGGCGTTTATCCACAAAAGCGGACGTATTTAGTTTTGGAGTTCTAATGTTGGAGATCATCTGTGGTCAACGAAACTTATCATTCAACTTGGATTTGGATGCACAGAACCTTATTGATTGGGCGTACAAGCTTTACAAAAAAGGGCGAAGCTTAGAAATCATGGACACTGCAATAGCAGCTTCAGCAGTGCCTGAACAAGTAGCAATGTGCATTCAACTTGGCCTGCTATGCATTCAAGGTGACCCCAACCAACGCCCCACCATGCACCGGGTGGTGGTGGTGTTGTCAAAAAAGCCGGGCCACTTGGAAGAACCGTCAAGACCCGGTGTGCCGGGTAGCTCGAGATACCGAAAGCATCACAATCATAATCCTTATGCATTGTCTTCCACAGTTGATAGTAGTTCTAGTGAATCTAGTACACATACAGGTATTTCAAGCAATATCTACGACACTAGGTCAACCGCAACGGCTGTCACAGCCGCCACAACCATGACCACAACCACCTCAGCTTCGAGAGAATTAGATTCACGTGGAAAACATGTAATTGATGAGGGTTAG 1365 0.4425 MMIVEGLVGVNCFLFGSRTNINNWSSVSASWASFLRHRAKETMIKSKSFLQSIMKHLKFGSSRERQNEDEVQRIAAREQKVFSYETLASATKNFNPHHKLGEGGFGPVYKGKLEDGREIAVKKLSVRSNQGKKEFINEAKLLARVQHRNVVNLLGYCVYGSEKLLVYEYVPHESLDKILFKSDRRKVLDWEKRFGIIMGIARGLLYLHEDSHDCIIHRDIKASNVLLDDKWNPKIADFGMARLFPEDETHVKTRVAGTNGYMAPEYIMYGRLSTKADVFSFGVLMLEIICGQRNLSFNLDLDAQNLIDWAYKLYKKGRSLEIMDTAIAASAVPEQVAMCIQLGLLCIQGDPNQRPTMHRVVVVLSKKPGHLEEPSRPGVPGSSRYRKHHNHNPYALSSTVDSSSSESSTHTGISSNIYDTRSTATAVTAATTMTTTTSASRELDSRGKHVIDEG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1663 454 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 62 409 - -
Lele50g1663 454 Gene3D Transferase(Phosphotransferase) domain 1 170 373 - -
Lele50g1663 454 SMART serkin_6 94 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1663 454 CDD STKc_IRAK 100 366 - -
Lele50g1663 454 SUPERFAMILY Protein kinase-like (PK-like) 79 377 IPR011009 -
Lele50g1663 454 Pfam Protein kinase domain 96 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1663 454 Gene3D Phosphorylase Kinase; domain 1 55 169 - -
Lele50g1663 454 FunFam Cysteine-rich receptor-like protein kinase 10 58 169 - -
Lele50g1663 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lele50g1663 454 MobiDBLite consensus disorder prediction 368 415 - -
Lele50g1663 454 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 170 372 - -
Lele50g1663 454 MobiDBLite consensus disorder prediction 433 454 - -
Lele50g1663 454 MobiDBLite consensus disorder prediction 392 415 - -
Lele50g1663 454 ProSiteProfiles Protein kinase domain profile. 94 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1663 Lele-ChrLele50 21652986 21660178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1663 62 384 Receptor kinase-like Gene Family AT4G11530 48.923 3.65e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele50g1663 Pkinase 2.9e-51 CL0016