Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1660 ATGATAACCCAACGCCTTCATCTCCTCTTCCTCCTCCTCCTCCTCGCCGCCTCATTTCATTGTCTCCGTCAATCCGCCGCGTTCACCGTCGTAGTTGACTCCACCACCGACTTCAACCCCAGCGCCACAACATTCATCCGCACAAGCTGTAACGCCACCCTCTACCCCGGCCTCTGCTACTCCTCCCTCTCTCCCTACTACAATGCCATCCAACATAACTCCGGCAAGCTCGCTCGAGTCGCCATAGCATTGACCCTTACTAAGGCCCACCGCATGGCCTCCTACCTCTCCGGCCTCTCTCGCGACGCAGACTACAGCACCAACTCACGCGCCACCTCTGCCCTCCGCGACTGCTTCACCAACCTCGGGGACGCAGTCGACGAAATCCGCGGCTCGCTCAAGCAGATGCGCCAGCTAGCAATCAACGGTGGTGCAGGCGGCGAGCAATTCAGGTTCCAGATGAGCAATGTGCAGACATGGATGAGCGCGGCGCTGACGGATGAGGACACGTGTACGGACGGGTTCGAGGATGTACCGGAAGGTGCTGTGAAGGCTGATGTACGTGATCGGATGACCTACTTGAAGGAGCTCACCAGTAACGCCTTGGCGCTGGTGAATAGTTACGCTAGCAAGGAAATGCGTTATTAG 648 0.5787 MITQRLHLLFLLLLLAASFHCLRQSAAFTVVVDSTTDFNPSATTFIRTSCNATLYPGLCYSSLSPYYNAIQHNSGKLARVAIALTLTKAHRMASYLSGLSRDADYSTNSRATSALRDCFTNLGDAVDEIRGSLKQMRQLAINGGAGGEQFRFQMSNVQTWMSAALTDEDTCTDGFEDVPEGAVKADVRDRMTYLKELTSNALALVNSYASKEMRY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1660 215 CDD PMEI-like_3 48 210 - -
Lele50g1660 215 Pfam Plant invertase/pectin methylesterase inhibitor 45 204 IPR006501 GO:0004857
Lele50g1660 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 208 IPR035513 -
Lele50g1660 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 204 - -
Lele50g1660 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 208 IPR035513 -
Lele50g1660 215 TIGRFAM PME_inhib: pectinesterase inhibitor domain 29 208 IPR006501 GO:0004857
Lele50g1660 215 SMART PMEI_2 41 204 IPR006501 GO:0004857
Lele50g1660 215 FunFam Pectin methylesterase inhibitor 1 41 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1660 Lele-ChrLele50 21629454 21630101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1660 8 204 Carbohydrate Esterase AT5G53370 29.353 1.09e-14 70.5