Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1646 ATGTTCTCGTGCAGGGCCGTGAGAAATGAGAATTCAAAGATGCTGATGGCGGCAACTGCAGTTTTTCTTCCTGTTCAACCATTGATGGTTTCAGTTGTTCACACTGGGATGATGGAGGTAGCATTTGCTAAAAGGGCATTGAAAGATCCAGACCTGAGGATGGCCCACAATGTGCATAAGTTGTCATCATTACTGGGCGGTGTGCTTTTCATAGCCGACGATTTATTTCCTGAAATTCCATACATTCATGCTGCTTGGCATCTTGCTGCAGCTGTTGGTGTAGTATGTGTGATGATTCATTCAGTGCCTTCAAGCTTCACTCTAGTTACACCCCAAATCCTTATTGTATTTGTGCCCACTGCAATCTTCGTCATCTGGGAGAGGAAGAAGGAGGCATTACTATTACGAGCAGCTCAAGGTGGAGCCCAACCTCGAGCAACTCTACACACAGGGAACCAAACTCCATCGTCTCAGCAAATACAGTTAATAGCTTCCCAGCTACGTCGTTTTGGCAATATACAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCAAGAGACCGCCACAAACGTCGTCGTTCCCACATGCAAATCTCTCCTCCTCCTGCTGCTGCTGCTCTGCAACACGCTCCTCGTCAAGATTGTGCAGCTAGATACAAAGATCAATTGAAGAGATTTCAACCTTGGGTTTCTGATTCACTGAATAGAGCAGAAACAGGAGCTTATAGGAGGACTCAAAGGGAAAAGGAGAAAGAAATACAAATTTTGAGAATCAAGAGAGAGAAAAGCCAAGAAGCTAAGTGCCAAATTAGAGATCATATGTCTTCTTACTTCCTTTCAAATTCTAAGCATCTCGTTATCAAAAGCATTACCCCTCATACACAAACTTCAAACCCTACAAATTATTATCGTCATGATGATGAAGAAGAAGTTGCAGATGACAGAACCCTTAAGCTGTTTACTCTTAAGAGATCAGATGGAGATGATGAAAGCAGAAAAGATAAAGATAAATTCCATTCCTTCAATGCTTCCATGGACTATGATGAAATCACTTCCAATCAGTTTTTTGAGTTCCTTCCTTTAAGAAGTGATATAATATAG 1107 0.421 MFSCRAVRNENSKMLMAATAVFLPVQPLMVSVVHTGMMEVAFAKRALKDPDLRMAHNVHKLSSLLGGVLFIADDLFPEIPYIHAAWHLAAAVGVVCVMIHSVPSSFTLVTPQILIVFVPTAIFVIWERKKEALLLRAAQGGAQPRATLHTGNQTPSSQQIQLIASQLRRFGNIQAKNVFYWFQNHKARDRHKRRRSHMQISPPPAAAALQHAPRQDCAARYKDQLKRFQPWVSDSLNRAETGAYRRTQREKEKEIQILRIKREKSQEAKCQIRDHMSSYFLSNSKHLVIKSITPHTQTSNPTNYYRHDDEEEVADDRTLKLFTLKRSDGDDESRKDKDKFHSFNASMDYDEITSNQFFEFLPLRSDII 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1646 368 Gene3D - 146 199 - -
Lele50g1646 368 PANTHER FOLD PROTEIN 4 96 - -
Lele50g1646 368 SUPERFAMILY Homeodomain-like 151 198 IPR009057 -
Lele50g1646 368 CDD homeodomain 152 193 IPR001356 GO:0003677
Lele50g1646 368 Pfam Homeodomain 151 191 IPR001356 GO:0003677
Lele50g1646 368 Coils Coil 248 268 - -
Lele50g1646 368 ProSiteProfiles 'Homeobox' domain profile. 152 192 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1646 Lele-ChrLele50 21506824 21512044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1646 151 195 Wox Gene Family AT3G18010 68.889 4.74e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele50g1646 Homeodomain 2.5e-10 CL0123