Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1642 ATGATTCTTCTCCTCATTACTCTGATTCTCCTTCTCTCCTACTTGGTGAAAATTTTCGTTTCCATCTTCTGGGTTCCATGGAAAATCCAGAGTGATTTTCACAAACAGGGGATAAGAGGGCCTGGCTACCGTCCGTTCGTCGGGAACTCCGGGGAGATCCGACGGCTGTATGCAGAATCTCAGTCCAAGACAATCCCTTTTGACCATGATATCCTAAAACGAGTAGTCCCATTTTACCATAAGTGGTCAAACATGTATGGGAAAACCTTCCTCTACTGGTTCGGGTCAAAGCCCCGACTGGCAATATCCGACCTGGATATGATTAAGGAAGTATTGATGAATAAGGGTGGAGAATTTGGTAAGGTGCCCTATAACCCTCAGTCTAAGCTTCTTTTTGGACAAGGACTTGTGGGCTTGGAAGGCAATCAATGGGCACTTCATAGAAGAATCATCAATCAAGCATTTAACCTGGAACTTATCAAGGGGTGGGTGCCAGAAATTGCAGCAAGTGTTCAAAAGACGCTAGAGAAGTGGGAGGAAGTAGGAGGAGGAAGAGAAGAATTCGAGGTGGATGTTAACAAAGAGATGCACAATGTTTCTGCAGAAGTTATATCAAGGACTGCATTTGGCAGCAGCTATGAAGAAGGCAAGCGTATTTTCAACTTACAAGAACAACAAATGCATCTCTTCTCACAAGCAATCAGGAGTGTCTATATTCCGGGATTTAGATATTTGCCTACTAAGAAGAACAGAGACAGAATGAAACTAGAAAAGGAAACTCGCGAATCGATTTGGAAGCTGATTGAAGCAAGGACCAAACAAAGAGGAAGTCCAAGAAATCTGTTAAGTTCACTTATGCAAACATACAAGAATGAGGATGGTGGAGAAGAGAGATTGACAATAGAAGAAATCATTGATGAATGTAAAACCTTCTACTTCGCCGGAAAGGATACCACTGCCAATTTGATGACTTGGGCACTTCTTCTCCTTGCTAAACATCAAGAATGGCAAAGCAAGGCACGAGAAGAAGTTCTTCGTGTTGTCGGGCAAAACCAGTCTCCACCTGCAGACAAATTAAACGACCTTAAGATCGTTGGGATGATAATTAATGAAACACTTAGGTTGTACCCTCCTGCTGTGATGATAATGAGGCAAACATGTAAAAAGGTTATGGTAGGAAGTCTGAGTGTTCCTGCTAAGACTCAACTCTACTTGGCATTGACTGCAATCCATCACGACAAAGAGATTTGGGGAGAAGATTGCAATGAGTTCAATCCGAACCGGTTTAGTGAGCCTCGAGGACATATAGCCGCGTTCTTTCCTTTTGGACTCGGCCCTCGAACTTGCATAGGTCAAAATTTAGCCATGGTTGAGGCAAAGATTGCTCTTGCTATGATCATCCGAGATTATAGTTTTGCAGTATCTCCAACCTATTGCCATTCTCCTATATTGTTCATAACTTTGCAGCCTCAACACGGTGCACAAATCCTCTTTAGAAGGATTTCATGCTGA 1512 0.4286 MILLLITLILLLSYLVKIFVSIFWVPWKIQSDFHKQGIRGPGYRPFVGNSGEIRRLYAESQSKTIPFDHDILKRVVPFYHKWSNMYGKTFLYWFGSKPRLAISDLDMIKEVLMNKGGEFGKVPYNPQSKLLFGQGLVGLEGNQWALHRRIINQAFNLELIKGWVPEIAASVQKTLEKWEEVGGGREEFEVDVNKEMHNVSAEVISRTAFGSSYEEGKRIFNLQEQQMHLFSQAIRSVYIPGFRYLPTKKNRDRMKLEKETRESIWKLIEARTKQRGSPRNLLSSLMQTYKNEDGGEERLTIEEIIDECKTFYFAGKDTTANLMTWALLLLAKHQEWQSKAREEVLRVVGQNQSPPADKLNDLKIVGMIINETLRLYPPAVMIMRQTCKKVMVGSLSVPAKTQLYLALTAIHHDKEIWGEDCNEFNPNRFSEPRGHIAAFFPFGLGPRTCIGQNLAMVEAKIALAMIIRDYSFAVSPTYCHSPILFITLQPQHGAQILFRRISC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1642 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Lele50g1642 503 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 Gene3D Cytochrome P450 22 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele50g1642 503 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 494 - -
Lele50g1642 503 FunFam Cytochrome P450 734A1 23 502 - -
Lele50g1642 503 Pfam Cytochrome P450 78 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1642 Lele-ChrLele50 21474969 21477865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1642 21 503 Cytochrome P450 AT1G75130 57.407 0.0 583