Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1640 ATGGAAAGTGGTGAAGACGGTCAGATCACGCCTCCCGAGCTTGTCATTAAGTCAATGCTCTCTCAGCTTGAGACAGGTGAAGGGCGAGCGAAGGGACTTGGGGAGGAAGTGTCTGTTAAGGCTGTTATCGGCCTCATTGTACACTTCTCCAAAATGGCGTCAACTGCACGTTCCAACTCTTTCACATTGCTCTTCTTCTTCTTCTTCCTCAGCGTCTCTGCTTCTTCAAATCCAACCGCTTCCTTCCCAAAACAAGCCTTGCCCTCAAAATCTGGCTACCTCCCTATTAATCGCACCTCCAAATCCTCCATTTTCTACGCTTTCTATGAAGCCCAGAACCTCACTTCACCTATCTCCCAAACCCCACTTCTTATCTGGCTCCAAGGCGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTACGAGCTCGGTCCATGGCGCGTCACCAAATCCCTCAATCTCTCCCCCAATCCTGGCTCTTGGAACAGAATCTTCGGCCTCGTTTTCCTCGATAGCCCAATCGGAACAGGATTCAGTATCGCCTCAAACCCTGACGAAATCCCCAGAGACCAGAAATCTGTCGCCAAACACCTCTTCACTGCTATAACCAAGTTCATCCAACTTGATCCAGCTTTCAAGTATCGCCCAATCTATATAACCGGCGAAAGCTACGCCGGGAAGTATGTTCCTGCAATTGGGTATTACATATTACAAAGGAATTCACGTTTGAATGCTTCCCAGAGGGTGCCTTTGGCAGGTGTGGCAATTGGGGATGGATTAACACACCCTATAGTACAAGTTTCAACTCATGCTTTGAATGCTTACTACATCGGTTTGATCAATGAAAGGCAGAAGAATGAATTGGAGAAGGCTCAATTGAAAGCAATCAGATTGACCAAACTGGGGAATTGGAGTGCAGCAACAGATGCTAGAAGTGATGCTTTGCGTCTGTTGCAGAACATGACCGGTTTAGCTACTTTGTATGACTACACAAGAAAAGCTCCATATGAAGATTATTTGGTGGATGAGTTCTTGAAATCCAGCGATGTGAAGAAGTCACTAGGGGTGAATGAATCTTTTGTGTTTGAAGAATGTAGTGAGGCTGTAGGAATCGCAATGAAAGAAGATATTATGAAGAGTGTGAAGTACATGGTGGAATACTTGGTGACAAAAACCAGAGTGCTTATGTATCAAGGGCAGTATGATCTGAAAGATGGTGTGGTTCAAGTAGAAGCGTGGGTGAAGAGAATGAAATGGGAAGGGATTGACAAGTATTTGAGTGCAGATAGGAAGATATGGAAAGTGAATGGCGAGATTGCTGGGTATGTTCAAAAATGGCAGAGCCTTACTAATGTTGTTGTTTTAAGATCTGGCCATCTTTTACCTACTGATCAATCTGTGATTTCTCAAGCCATGATTGAGAACTGGGTTTTGCAGAAAGATTTGTTTGTGAACGATGATTAA 1464 0.4501 MESGEDGQITPPELVIKSMLSQLETGEGRAKGLGEEVSVKAVIGLIVHFSKMASTARSNSFTLLFFFFFLSVSASSNPTASFPKQALPSKSGYLPINRTSKSSIFYAFYEAQNLTSPISQTPLLIWLQGGPGCSSMIGNFYELGPWRVTKSLNLSPNPGSWNRIFGLVFLDSPIGTGFSIASNPDEIPRDQKSVAKHLFTAITKFIQLDPAFKYRPIYITGESYAGKYVPAIGYYILQRNSRLNASQRVPLAGVAIGDGLTHPIVQVSTHALNAYYIGLINERQKNELEKAQLKAIRLTKLGNWSAATDARSDALRLLQNMTGLATLYDYTRKAPYEDYLVDEFLKSSDVKKSLGVNESFVFEECSEAVGIAMKEDIMKSVKYMVEYLVTKTRVLMYQGQYDLKDGVVQVEAWVKRMKWEGIDKYLSADRKIWKVNGEIAGYVQKWQSLTNVVVLRSGHLLPTDQSVISQAMIENWVLQKDLFVNDD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1640 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Lele50g1640 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Lele50g1640 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Lele50g1640 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Lele50g1640 487 Coils Coil 281 301 - -
Lele50g1640 487 Pfam Serine carboxypeptidase 85 478 IPR001563 GO:0004185|GO:0006508
Lele50g1640 487 SUPERFAMILY alpha/beta-Hydrolases 87 480 IPR029058 -
Lele50g1640 487 FunFam Carboxypeptidase 73 484 - -
Lele50g1640 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 89 465 IPR001563 GO:0004185|GO:0006508
Lele50g1640 487 Gene3D alpha/beta hydrolase 70 486 IPR029058 -
Lele50g1640 487 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1640 Lele-ChrLele50 21461220 21463533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1640 350 482 Calmodulin-binding Proteins AT2G22960 21.805 3.81e-08 51.6