Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1639 ATGGATTCAACAGCGAGATTCCACTCTTTCACACTCCTCATCTTCTTCTTCTTCATCTTCAATGAATCTATTTCTTCTTCAAATCCAACCCCTTACTTCCCAAAACAAGCATTGCCCACAAAATCTGGCTACCTCCCTGTTAACCCCAACTCCAAATCCGCCATTTTCTACGCTTTCTATGAAGCCCAGAACTTCACTTCACCTCTCTCCCAAACCCCACTTCTCATCTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATCGGCAACTTGTTTGAGCTTGGACCATGGCGCGTCACCGAGTCCTTGAATCTAATATCCAATTCTGGTTCTTGGAACAGAATTTTTGGCCTTCTTTTCCTCGATAACCCAATCGGAACTGGATTCAGTATCGCTTCAAACCCTGACGAAATCCCCAGAGATCAAAATTCTGTGGCCGAACACCTCTTCACAGCTATAACCAAGTTCATTCAACTGAACCCTGCTTTCAAGGATCGCCCAATCCATATAACCGGCGAAAGCTATGCTGGGAAGTATGTTCCTGCAATTGGGTATTACATATTACAAAGGAATTCACGTTTGAATGCTTACCAGAGGGTGAATTTAGCAGGTGTGGCGATTGGAGACGGGTTAACTCACCCAGAAGTGCAAGTTACTGCTCATGCTGCGAATGCTTACTTCTTAGGGTTGATCAACGAGAGGCAGAAGAATGAGTTGGAGAAGGTGCAATTCGAAGCCGTCAGATTGATCAAACAGGGAAATTGGAGTGCCGCAACAAATGCAAGAATCACCGTTCTCAGATTGTTGCATAACATGACAGGGTTGGCAACTTCGTTCGACTTCACCAAAAAAGCTCCTTATCAGAGTCATTTGGTCACTGATTTCTTGAAATCCAGCGAGGCGAAGAGGGCACTCGGGGTGAATGAATCTCTTGTTTTCGAAGGATGTAGTGATACTGTAAAAGCTGCATTGCATGAGGATGTGATGAAGAGTGTGAAGCACATGGTGGAATACTTGGTGACGAAAACCAGAGTTCTTCTATACCAAGGCCAGCATGATCTGAGAGATGGTCCAGTTCAAGTAGAAGCATGGGTGAAGACGATGAAATGGGAAGGAATTGAGAATTATTTGAATGCAGAGAGGAAGATCTGGAATGTGAATGGGGAGCTAGCAGGGTATGTTCAAAAATGGCAGAGCCTTACTAACGTTGTGGTTTTGGGAGCTGGCCATTATTTGCCAGCTGATCAAGCCGTGAACTCTCAAGCCATGATTGAAAACTGGGTTTTGCAGAAGGATTTGTTTGAGAATGATTATGTTTAG 1320 0.4492 MDSTARFHSFTLLIFFFFIFNESISSSNPTPYFPKQALPTKSGYLPVNPNSKSAIFYAFYEAQNFTSPLSQTPLLIWLQGGPGCSSMIGNLFELGPWRVTESLNLISNSGSWNRIFGLLFLDNPIGTGFSIASNPDEIPRDQNSVAEHLFTAITKFIQLNPAFKDRPIHITGESYAGKYVPAIGYYILQRNSRLNAYQRVNLAGVAIGDGLTHPEVQVTAHAANAYFLGLINERQKNELEKVQFEAVRLIKQGNWSAATNARITVLRLLHNMTGLATSFDFTKKAPYQSHLVTDFLKSSEAKRALGVNESLVFEGCSDTVKAALHEDVMKSVKHMVEYLVTKTRVLLYQGQHDLRDGPVQVEAWVKTMKWEGIENYLNAERKIWNVNGELAGYVQKWQSLTNVVVLGAGHYLPADQAVNSQAMIENWVLQKDLFENDYV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1639 439 Gene3D alpha/beta hydrolase 21 438 IPR029058 -
Lele50g1639 439 ProSitePatterns Serine carboxypeptidases, serine active site. 170 177 IPR018202 GO:0004185
Lele50g1639 439 SUPERFAMILY alpha/beta-Hydrolases 38 431 IPR029058 -
Lele50g1639 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Lele50g1639 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 181 IPR001563 GO:0004185|GO:0006508
Lele50g1639 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Lele50g1639 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Lele50g1639 439 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 416 IPR001563 GO:0004185|GO:0006508
Lele50g1639 439 Pfam Serine carboxypeptidase 38 429 IPR001563 GO:0004185|GO:0006508
Lele50g1639 439 FunFam Carboxypeptidase 24 435 - -
Lele50g1639 439 Coils Coil 232 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1639 Lele-ChrLele50 21458198 21459517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1639 326 433 Calmodulin-binding Proteins AT2G22960 24.107 1.07e-07 50.1