Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1631 ATGGAGATTAGTATGGGAGGGCCGTCATCGTTGTCTTACTATACCATTCTTGGTGTTAGTTCAGATTCAACCGCTACAGAAATAAGGAGAGCTTATCGCAAGCTTGCTTTGCAATGGCATCCAGATAGGTGGACAAGAACTCCTTCTTTGTTGACTGAAGCTAATCAGAAATTTCAGCAAATTCAAGAAGCTTATTCAGTTCTATCAGACCACAAGAAAAGAACAGTGTACGATGCAGGGTTGTATGATCCTGAAGACGAAGGAGATGCGGGATTTTCTGAGTTCATGGAAGAGATGGTGTCTCTCATGGCTCAAGTGAGGAGAGAGGGAAAGGATTATTACAGTATGGAGGAGTTACAGAGCATGTTTACTGAGATGGCTCGTGATTTTAATCAGTCATCTTCATGGTGTTGCGGGCCCTCCATTCTTGATGATGATGAGTCCCCTCACTTCTCAAAGAAGATCCGTTCAGACAAACATGGCAGAACCTGA 492 0.435 MEISMGGPSSLSYYTILGVSSDSTATEIRRAYRKLALQWHPDRWTRTPSLLTEANQKFQQIQEAYSVLSDHKKRTVYDAGLYDPEDEGDAGFSEFMEEMVSLMAQVRREGKDYYSMEELQSMFTEMARDFNQSSSWCCGPSILDDDESPHFSKKIRSDKHGRT 163
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1631 163 Pfam DnaJ domain 13 78 IPR001623 -
Lele50g1631 163 Gene3D DnaJ domain 10 135 IPR036869 -
Lele50g1631 163 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Lele50g1631 163 SMART dnaj_3 11 73 IPR001623 -
Lele50g1631 163 CDD DnaJ 13 70 IPR001623 -
Lele50g1631 163 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Lele50g1631 163 PRINTS DnaJ domain signature 153 163 IPR001623 -
Lele50g1631 163 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lele50g1631 163 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lele50g1631 163 PRINTS DnaJ domain signature 53 73 IPR001623 -
Lele50g1631 163 SUPERFAMILY Chaperone J-domain 10 85 IPR036869 -
Lele50g1631 163 MobiDBLite consensus disorder prediction 142 163 - -
Lele50g1631 163 PANTHER PUTATIVE, EXPRESSED-RELATED 9 141 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele50g1631 Lele-ChrLele50 21393706 21394788 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1631 13 79 C2H2 Transcription Factor Family AT1G74250 47.059 6.83e-14 66.6
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1631 50 21393706 21394788 Lele50g1631 50 21393706 21394788 ECH
Lele50g1631 50 21393706 21394788 Lele51g1230 51 8114606 8115721 hybridization
Lele50g1631 50 21393706 21394788 Lele52g1587 52 19782112 19783225 hybridization