Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele50g1631 | ATGGAGATTAGTATGGGAGGGCCGTCATCGTTGTCTTACTATACCATTCTTGGTGTTAGTTCAGATTCAACCGCTACAGAAATAAGGAGAGCTTATCGCAAGCTTGCTTTGCAATGGCATCCAGATAGGTGGACAAGAACTCCTTCTTTGTTGACTGAAGCTAATCAGAAATTTCAGCAAATTCAAGAAGCTTATTCAGTTCTATCAGACCACAAGAAAAGAACAGTGTACGATGCAGGGTTGTATGATCCTGAAGACGAAGGAGATGCGGGATTTTCTGAGTTCATGGAAGAGATGGTGTCTCTCATGGCTCAAGTGAGGAGAGAGGGAAAGGATTATTACAGTATGGAGGAGTTACAGAGCATGTTTACTGAGATGGCTCGTGATTTTAATCAGTCATCTTCATGGTGTTGCGGGCCCTCCATTCTTGATGATGATGAGTCCCCTCACTTCTCAAAGAAGATCCGTTCAGACAAACATGGCAGAACCTGA | 492 | 0.435 | MEISMGGPSSLSYYTILGVSSDSTATEIRRAYRKLALQWHPDRWTRTPSLLTEANQKFQQIQEAYSVLSDHKKRTVYDAGLYDPEDEGDAGFSEFMEEMVSLMAQVRREGKDYYSMEELQSMFTEMARDFNQSSSWCCGPSILDDDESPHFSKKIRSDKHGRT | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele50g1631 | 163 | Pfam | DnaJ domain | 13 | 78 | IPR001623 | - | |
Lele50g1631 | 163 | Gene3D | DnaJ domain | 10 | 135 | IPR036869 | - | |
Lele50g1631 | 163 | ProSiteProfiles | dnaJ domain profile. | 12 | 81 | IPR001623 | - | |
Lele50g1631 | 163 | SMART | dnaj_3 | 11 | 73 | IPR001623 | - | |
Lele50g1631 | 163 | CDD | DnaJ | 13 | 70 | IPR001623 | - | |
Lele50g1631 | 163 | ProSitePatterns | Nt-dnaJ domain signature. | 58 | 77 | IPR018253 | - | |
Lele50g1631 | 163 | PRINTS | DnaJ domain signature | 153 | 163 | IPR001623 | - | |
Lele50g1631 | 163 | PRINTS | DnaJ domain signature | 32 | 47 | IPR001623 | - | |
Lele50g1631 | 163 | PRINTS | DnaJ domain signature | 14 | 32 | IPR001623 | - | |
Lele50g1631 | 163 | PRINTS | DnaJ domain signature | 53 | 73 | IPR001623 | - | |
Lele50g1631 | 163 | SUPERFAMILY | Chaperone J-domain | 10 | 85 | IPR036869 | - | |
Lele50g1631 | 163 | MobiDBLite | consensus disorder prediction | 142 | 163 | - | - | |
Lele50g1631 | 163 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 9 | 141 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele50g1631 | Lele-ChrLele50 | 21393706 | 21394788 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele50g1631 | 13 | 79 | C2H2 Transcription Factor Family | AT1G74250 | 47.059 | 6.83e-14 | 66.6 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele50g1631 | 50 | 21393706 | 21394788 | Lele50g1631 | 50 | 21393706 | 21394788 | ECH | |
Lele50g1631 | 50 | 21393706 | 21394788 | Lele51g1230 | 51 | 8114606 | 8115721 | hybridization | |
Lele50g1631 | 50 | 21393706 | 21394788 | Lele52g1587 | 52 | 19782112 | 19783225 | hybridization |