Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1601 ATGGTGCCTTTTGGCGGGAAAAAGTTGCGCCAAATGGTTTCAGGCTTCGGTGGTAACGGTCTTGGCCAGGTCCTCGCCGCTGTGGCTGTGACCCTCCTTGTCCGCCTCTTCTCTGGTCCCGGTCCCGTACTCCCACCTGAAACCGAGAATGAGGACTACGGCGATGGCGGGGAGAAGGATGATGTTGAAGAAGGTGAGAGTGAAGGTCCGGTTTCTGGTAACGTTTTTCCGGTCACAATCCGGTGGAGCAACATCACCTTGTTTCTTTCTGATAAATCCTCCAAGTCTGTGAGATTTTTGCTCAAAAATGTGAGCGGAGAAGCAAAGCCTGGAAGATTATTAGCTATAATGGGCCCGTCAGGTTCTGGAAAAACTACATTGCTCAATGTTCTTGCGGGTCAACTAGCAGCATCTCCCCGGCTGCATCTGTCAGGCCTTTTGGAGTTCAATGGCGAGCCTAGTTCAAAGAGAAGTTATAAGTTTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCACAGCTCACAGTGCGAGAGACATTGTCCATTGCTGCAGAACTCCAGCTTCCTGGCATATCTTCCGTGGAAGAGAAGGATGAATACGTGAAAAATCTCTTGTTCAAACTAGGATTGGTCAGCTGCGCTGATACCGTTGTCGGTGATGCAAAAGTTCGGGGAATTAGTGGTGGTGAAAAGAAACGTTTATCTCTGGCATGTGAGCTTCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCAACTACTGGACTTGATGCCTTTCAGGCTGAGAAAGTGGTCGAAACTCTCCAACAACTTGCACAAGATGGTCATACAGTAATTTGCTCTATTCATCAGCCAAGAGGTTCAGTGTATAACAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCATTGGCATACTTCTCAAAATTTGGGCACCATTGCCCTGAGCATGTGAATCCTGCTGAATTTTTGGCCGATCTTATATCCATTGACTACAGTTCTGCTGAAAGCGTCTCTTCCTCTCAAGAGAGAATTGATAGTCTTGTTGAGTCATTCTCAGAAAGAATTTCTACGATGATATATGCAACTCCAATTACACAAGAAGTGCTTCACAAAAGTGGAAAGAGAATTGGGATGAGAACTGTAGCCAAGAAGAAAGGAAGTTGGTGGAAACAATTCTGGTTGCTCCTCAGGCGAGCATGGATGCAGGCTTCCCGTGATGGACCAACAAACAAAGTTCGAGCAAGGATGTCAATCGCATCAGCAGTTATTTTTGGTTCAGTTTTCTGGAGAATGGGAAGATCTCAGACTTCAATACAGGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTTACAAAGACTGTTGGGGTGTTTCCAAAGGAGCGTGCAATTGTAGATCGAGAACGTGCAAAAGGCTCCTATTCATTGGGTCCTTATCTGTTTTCAAAATTGTTGGCTGAGATTCCTATCGGAGCAGCTTTTCCACTGATGTTTGGTGCCATTTTGTACCCTATGGCACGTCTTCATCCTACTTTACAGAGATTTGGGAAATTCTGTGGCATAGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCCAACCACGGAAGCAGCCATGGCAGTTGGCCCCTCTCTAATGACCGTTTTTATTGTATTTGGAGGCTATTATGTTAATCCGGAAAATACTCCAATCATCTTCCGCTGGATTCCTCGTGTTTCTCTCATTAGATGGGCCTTTCAAGGACTCTGCATCAATGAATTTAGCGGTCTTCAATTTGAACATCATAATCCATTTGATATTCAAACAGGAGAACAGGCACTGGAGCGCATATCTTTTGGAGGAAGCAAAATTAGGGATACAGTGGTAGCACAAAGTAAGATACTGTTATTTTGGTACTGCACCACCTACCTTCTCCTTGAGAAGAACAAGCCAAAGTACCAGCAACTTGAGCCACCAGCACTCGATCACAACAAATCGCATTCAAGACTTGAGGAGCTTAATCCTGAACTATTGCATTCAAAACTCGAGGAGCTTAAACCTGAACAAGATGATCAGACACTTGAAGATGAACCAGTGACTAAACAGGTCGATTCAAATCAAGTTGATCCTGTTGAACCTTTCGTCCCAGAAGGTCGTACAGGTGCTGAGTAA 2229 0.4504 MVPFGGKKLRQMVSGFGGNGLGQVLAAVAVTLLVRLFSGPGPVLPPETENEDYGDGGEKDDVEEGESEGPVSGNVFPVTIRWSNITLFLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGEPSSKRSYKFAYVRQEDLFFSQLTVRETLSIAAELQLPGISSVEEKDEYVKNLLFKLGLVSCADTVVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYAGPARDEPLAYFSKFGHHCPEHVNPAEFLADLISIDYSSAESVSSSQERIDSLVESFSERISTMIYATPITQEVLHKSGKRIGMRTVAKKKGSWWKQFWLLLRRAWMQASRDGPTNKVRARMSIASAVIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAILYPMARLHPTLQRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPRVSLIRWAFQGLCINEFSGLQFEHHNPFDIQTGEQALERISFGGSKIRDTVVAQSKILLFWYCTTYLLLEKNKPKYQQLEPPALDHNKSHSRLEELNPELLHSKLEELKPEQDDQTLEDEPVTKQVDSNQVDPVEPFVPEGRTGAE 742
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1601 742 Pfam ABC transporter 101 253 IPR003439 GO:0005524
Lele50g1601 742 MobiDBLite consensus disorder prediction 51 67 - -
Lele50g1601 742 CDD ABCG_EPDR 77 308 - -
Lele50g1601 742 MobiDBLite consensus disorder prediction 41 72 - -
Lele50g1601 742 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 69 631 - -
Lele50g1601 742 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 80 326 IPR003439 GO:0005524
Lele50g1601 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 312 IPR027417 -
Lele50g1601 742 Pfam ABC-2 type transporter 283 349 IPR043926 GO:0140359
Lele50g1601 742 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Lele50g1601 742 Gene3D - 78 315 IPR027417 -
Lele50g1601 742 Pfam ABC-2 type transporter 403 613 IPR013525 GO:0016020|GO:0140359
Lele50g1601 742 MobiDBLite consensus disorder prediction 705 742 - -
Lele50g1601 742 SMART AAA_5 110 303 IPR003593 -
Lele50g1601 742 FunFam ABC transporter G family member 7 78 316 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele50g1601 Lele-ChrLele50 21086744 21091657 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1601 100 304 Calmodulin-binding Proteins AT2G36910 29.187 1.11e-10 63.5