Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1581 ATGTCTCTCTCTCTCTCACCCTCTCTTCTTCCCGCTTCTTCTTCCTCTTCCCTCCACCCCCATGCGTACTTTAGCCCTTCCCTTCCTTCCATGTCTATTCTACGCTGCCTAGCTCATCGCTTCCCCCGCCGCGTAAACCTCCGACGCCATCGTTTCGCTTCCGTTGCGGCCGCCGCCGTTAGGCAGGATACTACCGTCTGGACCCCTGCCCCACTCTCCGACGTTGAACCCGCCGCCGAGTCCCTCTTTCACGTCACTGTCGATTTGTCCGACTCGCCTGATTTGGCAGCATCTCACACGCAGCCCGGGCAGTACCTCCAGTTGCGTGTTCCTGACGCCTCCAAGCCTTCCTTCCTTGCCATCGCGTCGCCTCCGAAGCTCGCTTCGGCGCGTGGCGTGTTCGAGTTTCTTGTCAAGAGCGTGCCGGGATCTATCGCTGAGATTCTATGCGGATTGAAGAAAGGGACTGTGGTGGAACTGAGTCAGCTTATGGGGAATGGGTTCGATACGAGTCGGATTGATCCTCCTGAGAAATATGCGACGGTTTTTATTTTTGCGACCGGATCCGGAATTAGTCCAATTCGATCACTTATTGAGTCTGGATTTAGTGCTGCTGAGAGATCTGATGTGAGGCTCTATTACGGGGCTACAAACCTTCAAAGAATGGCTTATCAGGATAGATTCAAAGACTGGGAATCATCTGGTGTTACGATTGTTCCCGTCTTGTCTAAACCAGATGGTAGTTGGACTGGGGAAAGTGGTTATGTGCAGGCTGCTTTTACAAGATCCAAGCAAATTACTAATCCTTTGTCAACCGGTGCTGTACTTTGTGGGCAGAAACAGATGACTGAGGAAGTGACATCCATTCTTATTGCTGATGGAGTCTCAAGTGATAAGATTTTGAAGAACTTCTGA 915 0.5148 MSLSLSPSLLPASSSSSLHPHAYFSPSLPSMSILRCLAHRFPRRVNLRRHRFASVAAAAVRQDTTVWTPAPLSDVEPAAESLFHVTVDLSDSPDLAASHTQPGQYLQLRVPDASKPSFLAIASPPKLASARGVFEFLVKSVPGSIAEILCGLKKGTVVELSQLMGNGFDTSRIDPPEKYATVFIFATGSGISPIRSLIESGFSAAERSDVRLYYGATNLQRMAYQDRFKDWESSGVTIVPVLSKPDGSWTGESGYVQAAFTRSKQITNPLSTGAVLCGQKQMTEEVTSILIADGVSSDKILKNF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1581 304 Gene3D Translation factors 60 165 - -
Lele50g1581 304 Pfam Oxidoreductase NAD-binding domain 186 286 IPR001433 GO:0016491
Lele50g1581 304 Gene3D - 177 304 IPR039261 -
Lele50g1581 304 PRINTS Phenol hydroxylase reductase family signature 183 202 - -
Lele50g1581 304 PRINTS Phenol hydroxylase reductase family signature 100 112 - -
Lele50g1581 304 PRINTS Phenol hydroxylase reductase family signature 208 217 - -
Lele50g1581 304 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 65 170 IPR017927 GO:0016491
Lele50g1581 304 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 175 301 IPR039261 -
Lele50g1581 304 SUPERFAMILY Riboflavin synthase domain-like 63 167 IPR017938 -
Lele50g1581 304 CDD FNR_like 75 301 - -
Lele50g1581 304 PANTHER - 11 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1581 Lele-ChrLele50 20977664 20981900 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1581 50 20977664 20981900 Lele50g1581 50 20977664 20981900 ECH
Lele50g1581 50 20977664 20981900 Lele51g1263 51 8362267 8365716 hybridization
Lele50g1581 50 20977664 20981900 Lele52g1534 52 19355416 19359547 hybridization