Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1567 ATGCCACCCTCTCACCTCAACTACCCTGACTCTGTTGATTCTTCTCCCCGTTCCCGCAACGCCGACTCCTGGGATGACCCTTTCCCTCCCACTACTGCCTCCTCTAAGCTCCGCCTCATGTGTAGCTATGGCGGTCACATCGTCCCTCGCCCTCACGACAAGTCTCTGTGTTATGTCGGTGGCGATACTCGTATCGTCGTCGTTGACCGGAACACCTCTCTCTCCGACTTTTCTTCTCGCCTCTCTAAAACCTTCCTTAATGGCCGTCCTTTCACTCTCAAATACCAGCTTCCAAGTGAAGACCTCGATTCCTTGATTTCTGTCACTACTGATGAGGATTTTGATAATATGATCGATGAGTATGATCGAACTGCTTCGAATTCGTCGGTTAAGCCATCCCGAATCCGCCTCTTCTTGTTCCCGACGATGCCTGAATCGTCGCAATCGATTGGGCCTATACTTGATAATTCGGCTAAATCGGATGACTGGTTCCTGAACGCGCTAAACGGCACAGGAGTGCTCAATAGAGGATTTTCTGAGGCTGGTTCTGTAAATTGCTTGCTGAGTCTCGATGATGAGCCTGGTGGGAATAACCTGAACTCGGTTTCTAGGGAAAATGAAGTTGCTCAACAGTCTGGATCTTTCGGGAATGGCAAGAATGTGATGAAGCAAGGACAGGATGTTCACTCTGTGCCTGATTCCCCTATGCTGGAAACGACCTCGTCTTTTGGGTCTACTTCTTCGTCACCTTCGCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGTGGGTGATAGGATGCAAGATCAGAAGGCGGTCGGAATTGAGGATCATTTTGCTCAAATGGGTGTTAGTGGTGGTGGTGGTGGTGGGCAGAGGCAAGATGAGGCGTTTGTAGTTCTGTCTTCTCCTCCTCCGATGCCGGCGACCATAACAACCCCGATGGTTGTGCCGATCAGCTCCGCCGTTGTTTCTGCCGGCGAATACCAGAATCGGGTTTTCTCCGACGATGAGAGACCAGACCACGGAGTCCCTGTGGGTTACAGAAAACCTATGATACAGCAGCCACAACCACAGCCTCAGGCTCAGCCTCAGAATCTGGCTCCTCAATTTCAACAGAAGTCAACCGGCGTTGTTGATTTGCCTTCCCCAGATTCAGTTTCAAGTGATGGTAGTCTTTCAAATCCATTGTCACGTCTAAAGCCTGTACTCTATCAAGAACAAGTTCAAATCCCCACTGTGACCACAAGGGTTCCTAGCAATCCTGCTGATCCAGTAAAGCTTAATATGTCTGATCCTCACACTCGGATCCAGATACAGCAACAGGTGCAGGACCCTGGATATGTATTGCAACGACAATTTGATCCGCAGCAACAACCTCAACAGCAGCAGAAGCAGCAATATATACCAAATTCCCATTTCATTCACCATACCCCAGCCGGCGCAGTGCAAATCCCAGCATACTATCCTGTATATCCTTCCCAGCAACAATCTCATCCTCAGCATGATCAGCAATACCCAGTTTACTACATGCCTGCAAGACAGGCCCAACCTTACAACTTATCAATGCAGCAGCAGCAGCAACCTAATATTGGTGAAACCAACGCAGCCATCCCTTCTAGCCAACCCCAAGCTCAGCCAAATCCGACAATGGTTCCATCGTCTGCAGCTTACAATCCTGTAAGAAATGTTCCCATTCCGAAGGCTGAAATGGCTGCTGGCGCATACAGAACAAGTGCGGGCATCCCCCAATTAGTTCAAGTCCCTTCTACTCAGCCTCAGCAACAATTTGTTGCTTACTCTCAGATTCATCATCCCTCTCAGACTGCTGCCCCGGCAAATTATGCTTATGACTATGCCGATCCAGCTCATGCTCAGATTTACTACACCCAACCTTTGGCTCCTACCGTGCCTTCACAGTACCAAACCATGGCAGCTCCGGCTGTTGTGCTGCCAGAAGTTTCTTCTCAGCTTCCTCCTGATAGCATAAAGCAGCAGATAAGAACCTCACAGCCAATATAA 2022 0.4951 MPPSHLNYPDSVDSSPRSRNADSWDDPFPPTTASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDFSSRLSKTFLNGRPFTLKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSSVKPSRIRLFLFPTMPESSQSIGPILDNSAKSDDWFLNALNGTGVLNRGFSEAGSVNCLLSLDDEPGGNNLNSVSRENEVAQQSGSFGNGKNVMKQGQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVGDRMQDQKAVGIEDHFAQMGVSGGGGGGQRQDEAFVVLSSPPPMPATITTPMVVPISSAVVSAGEYQNRVFSDDERPDHGVPVGYRKPMIQQPQPQPQAQPQNLAPQFQQKSTGVVDLPSPDSVSSDGSLSNPLSRLKPVLYQEQVQIPTVTTRVPSNPADPVKLNMSDPHTRIQIQQQVQDPGYVLQRQFDPQQQPQQQQKQQYIPNSHFIHHTPAGAVQIPAYYPVYPSQQQSHPQHDQQYPVYYMPARQAQPYNLSMQQQQQPNIGETNAAIPSSQPQAQPNPTMVPSSAAYNPVRNVPIPKAEMAAGAYRTSAGIPQLVQVPSTQPQQQFVAYSQIHHPSQTAAPANYAYDYADPAHAQIYYTQPLAPTVPSQYQTMAAPAVVLPEVSSQLPPDSIKQQIRTSQPI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1567 673 MobiDBLite consensus disorder prediction 1 29 - -
Lele50g1567 673 MobiDBLite consensus disorder prediction 207 227 - -
Lele50g1567 673 PANTHER OS05G0427100 PROTEIN-RELATED 7 527 - -
Lele50g1567 673 MobiDBLite consensus disorder prediction 332 399 - -
Lele50g1567 673 Pfam PB1 domain 52 141 IPR000270 GO:0005515
Lele50g1567 673 SMART PB1_new 51 142 IPR000270 GO:0005515
Lele50g1567 673 CDD PB1_UP2 40 140 - -
Lele50g1567 673 MobiDBLite consensus disorder prediction 354 399 - -
Lele50g1567 673 ProSiteProfiles PB1 domain profile. 36 142 IPR000270 GO:0005515
Lele50g1567 673 MobiDBLite consensus disorder prediction 207 224 - -
Lele50g1567 673 SUPERFAMILY CAD & PB1 domains 52 149 - -
Lele50g1567 673 Gene3D - 56 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1567 Lele-ChrLele50 20853884 20856071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1567 36 185 MAP Kinase Kinase Kinase AT3G46920 39.869 1.72e-26 114