Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1563 ATGGCTTGCAACCCATCATGTCACTATCGCCATTGTTGTCACTCAGAGGGAATATTCGGTGGTTGCTGTTGCAGTCATTGCTTAGAAGAAGACATGGTGGTTTCTGTTGCCGTCACTGCTCGAGAGGAGACGAGGTGGGTCACCATTCGCCGCTTTATTACTCTGATAACAATGGAAGATCGAAGAAGATTGTCATTGTTCAACTGTGTTCCAAGCTTTGCACAAGGCACTGATATTTTACTCGTTCATAATGACACTTTGTGTCTTCCCTATCTATCTTCACTTCTTCGCCAATGCTCATTCAGAGTTACTGCAACAAATCAAGCAACAGCGGCTATTGACATGGTTTGTGAACAAGAAGGAAGGTTCAAACTTATGATTGCGAAAGCTAACATGCCTGACATGGACACAATTTCTTTCCTCAATACACTTCTTCTCAAGCATATCACTGTCATATTTATATCCTCTGGAAAAAATGATGGTGGGGCAAAGGCAGCTTTTGAAAGAGGATCATGTTATCTCCTACAGGAACCAATCCATTCAGAGGATCTCATATCTGTGTGGCAACAAGTCTATAACTCAAATACTAGCTACTTAGCACAAGGGGTTCATGCTGCAAAATCTAAAAAAATGGTGCACGAATCAAGTGAAAATAGAGACAAAACTCATCATGATGTCATAATAGTGAAGAGAAAAAGGAAGAGAGAACATAATCATGCTGCAGAGAAGGAGGGAGAAGAAACAAGACAACATCACAATGATTTATTCCCTCGGAAAAAGCCACATATTTCTTGGACTTGGGATCTGCATCACAAGTTTGTACATGCCATATATATTCATCCAACTCCAAGATTGATACAAGAGATCATGAATGTTCCTTACCTGACATATGGCAATATTTCTAGCCATCTACAGAAATTCAAAGCAAGGTGTCTTCAGGATAAGTGCAATGGAACCAAGTCAGCCTCATCAATACAGAGACAGTGTTACCCAGGTGAGGAAGCATTTGAAGGATTCAGCTTACAAATAAAGACAGAAATACTGGGATTCAACCATGAAAGCAGAAATAAAACAAATATTTCCAAGAAAAGTTACCCCACTTTAGCTGCTTTCCAAAATGAGAACCAGAGTCAAAACCATTTTTCAGGGAACTTCCCTGAAACCAAAGGACCGGAAAATTTTCAGATGCAGGAAAACTTTTCATGTCAACATCAAGCAGAATTGGTCAATTATGGAAACCAAGATCTAGAAGCTGTAGTGAGAGGAGCTGTGCCAGATTCTTTAATGGATAAAAACCAGTATGATAACTTTGGAAATGGATTCACTGAAGATGATAGTGCCCAAAACTCTGAGATACAAATGAATCTAATCTTTGGAAACAGTTTTAGTCCACACAATTCTGCTATATTAGGAGAACTTGAGCCATGTGCTTCAATGAATCAAAGCCAAAACCTTACAGAAGATACAAATATATTAAGAATTACTGGAGGAGATAGTGAAGGATATGACTGTTTTAGAAGGGCTAAGCCATGTACATTTGTGGGAGGACATGAATTAATTGATCAAAATAAAACCTCTTTTACAGAAAATGACAGTGTCTTGAGTTTTCTTGGAGAAGGACATGGCCAAAAATCTGAGATGCTAAGAAATTCAGTCCTTGGTCACAGCTTTGGTGTGCAGAATTCTGATGACTACAACCCTAGTTGTTTTAAACTTTTGAAGTCCAAGATTGATGATTTGAAGAATCAAACTCAAACTTCAACAGAATATAATGATATCTCTAGATTTCTTCTTGAAGAGGATTGTGATACTACCCTAAACTCTAAGATACTGAGGAATTCTGTCTCTGGAAGCAGCTCTGATTACTGCAATAATGAAAGTGTAGTAAGATCATGTTCTGTAGTGGGAGGAAGTATGCCAGATGCTTTGACGGATCATGACAAAACCCTGAATGAACATGATAATTCGAGAATTTTTGGGGATGATGATTCTGATGCATATGGCTGTTTTGGAAATACTGCACCCAGTTCAGATGATATTGCGACGCTGGAGTCTGACAGGAGCTTCATGTCAGGACCTTTGAAGCAACTCGGTTTATAG 2100 0.3895 MACNPSCHYRHCCHSEGIFGGCCCSHCLEEDMVVSVAVTAREETRWVTIRRFITLITMEDRRRLSLFNCVPSFAQGTDILLVHNDTLCLPYLSSLLRQCSFRVTATNQATAAIDMVCEQEGRFKLMIAKANMPDMDTISFLNTLLLKHITVIFISSGKNDGGAKAAFERGSCYLLQEPIHSEDLISVWQQVYNSNTSYLAQGVHAAKSKKMVHESSENRDKTHHDVIIVKRKRKREHNHAAEKEGEETRQHHNDLFPRKKPHISWTWDLHHKFVHAIYIHPTPRLIQEIMNVPYLTYGNISSHLQKFKARCLQDKCNGTKSASSIQRQCYPGEEAFEGFSLQIKTEILGFNHESRNKTNISKKSYPTLAAFQNENQSQNHFSGNFPETKGPENFQMQENFSCQHQAELVNYGNQDLEAVVRGAVPDSLMDKNQYDNFGNGFTEDDSAQNSEIQMNLIFGNSFSPHNSAILGELEPCASMNQSQNLTEDTNILRITGGDSEGYDCFRRAKPCTFVGGHELIDQNKTSFTENDSVLSFLGEGHGQKSEMLRNSVLGHSFGVQNSDDYNPSCFKLLKSKIDDLKNQTQTSTEYNDISRFLLEEDCDTTLNSKILRNSVSGSSSDYCNNESVVRSCSVVGGSMPDALTDHDKTLNEHDNSRIFGDDDSDAYGCFGNTAPSSDDIATLESDRSFMSGPLKQLGL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1563 699 Gene3D - 77 213 - -
Lele50g1563 699 Gene3D - 257 313 - -
Lele50g1563 699 PANTHER TWO-COMPONENT RESPONSE REGULATOR 79 337 IPR045279 GO:0009736
Lele50g1563 699 ProSiteProfiles Response regulatory domain profile. 78 192 IPR001789 GO:0000160
Lele50g1563 699 MobiDBLite consensus disorder prediction 232 251 - -
Lele50g1563 699 Pfam Response regulator receiver domain 79 186 IPR001789 GO:0000160
Lele50g1563 699 SUPERFAMILY Homeodomain-like 258 309 IPR009057 -
Lele50g1563 699 SUPERFAMILY CheY-like 76 193 IPR011006 -
Lele50g1563 699 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 260 309 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1563 Lele-ChrLele50 20818052 20822437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1563 73 309 Response Regulator Gene Family AT4G31920 32.510 1.04e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele50g1563 Response_reg 7.1e-08 CL0304