Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1557 ATGAACCCAACGACCTCCTTCTTCGTCCTCGTCTTCTCTGTTCTAATCAGAACCACGCTCTGTTATTTGAATCCGAACTTCCAAGCTTGCGAGCCCAAATCCTGTGGAAACGGCCCTACCATAACCTATCCCTTCCATATCAGAGGCAAACAAGAGCGCTTATGTGGATTCCCTTTTCTTGGCCTTGTCTGTGCTCCCAATGGCTTCCCAATGCTCAATCTCTCCAATACTTTCTACATCGTCCATGAAATTTTCTACGACAATCTCTCTCTTCGACTCTCCAATCCTAAATTTCCAATCTCCAATTCCACCAATTGTCTCTCTCCCTCCAACAGCCTCTCTCTCGACTTCAGATTTACTTTTGCTCCGAACCAGAAGGAGGTGCTGCTGTTCTCCGATTGTGACTCATCGACGCTGCCGGAGGAGATGGAAGAGAACGTGGTTGGGTGTTATGAAGGGAACAGAACGAGGTCGGTGTTGGGTGTGGCGGCGGATGATGAAGAGAAGAAGTTGAAGTATGCGAAGGATAATTGCAGGGGTAGTGGGATTATTACGACGGCGGTGGAGGATGCGGAAGGAGGGATAAGAGGGGCTTTGGGAAGAGGTTTCTTGTTGAAGCTAGGGAATTGGACGGCGACCGAGTGCAACGCATGCGAGAGCAGCGGAGGGAGGTGTGGCTTCCCCCGCGTAAATGGGTTTGGCTTCAGGTGCTTCTGCCGCGACCGCGACCATCTTAAGATGTGTCCTTCAGTGGAAGCAAGTGTTTTGAGAACTAGATTTGACAATCGGTTCGACCTGTTGAACTGGGAATTAGTCCGGCGTTGTGCAGTTTTCCTTTTGATACAACGGAAAGCAATAGTCCGGCAAACGGGATTTGAAGCTGGGACTGGGATTAGGTTTAGGAATAGGAGTCCTAGGGGTGATAGCAATGGGGATGATGATGTCGTGGTGGTGGTGGAGAAGAAAATATGGCGATTCAGATTCAATAGACAGAGCCTCGTTCTCCCTACAGTGTTGCTGATAAATGGGGAAGCCAATCTACGACGCCCAATATCAGTGCTTGAGCAAGTGTTCAACATTACAAACAAGAGGATGTTGGAGGTGCTGGAGGTAGATATAGAGTCCTCTGAGAAAGAAAGGTAG 1143 0.4899 MNPTTSFFVLVFSVLIRTTLCYLNPNFQACEPKSCGNGPTITYPFHIRGKQERLCGFPFLGLVCAPNGFPMLNLSNTFYIVHEIFYDNLSLRLSNPKFPISNSTNCLSPSNSLSLDFRFTFAPNQKEVLLFSDCDSSTLPEEMEENVVGCYEGNRTRSVLGVAADDEEKKLKYAKDNCRGSGIITTAVEDAEGGIRGALGRGFLLKLGNWTATECNACESSGGRCGFPRVNGFGFRCFCRDRDHLKMCPSVEASVLRTRFDNRFDLLNWELVRRCAVFLLIQRKAIVRQTGFEAGTGIRFRNRSPRGDSNGDDDVVVVVEKKIWRFRFNRQSLVLPTVLLINGEANLRRPISVLEQVFNITNKRMLEVLEVDIESSEKER 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1557 380 Pfam Wall-associated receptor kinase C-terminal 152 241 IPR032872 -
Lele50g1557 380 Pfam Wall-associated receptor kinase galacturonan-binding 30 94 IPR025287 GO:0030247
Lele50g1557 380 PANTHER OS01G0690200 PROTEIN 5 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1557 Lele-ChrLele50 20765462 20770850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1557 28 238 C3H Transcription Factor Family AT2G46495 26.201 1.70e-06 47.8