Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1554 ATGAGTAGTAATGGTAAATCTCATGGTGGTAATCAAAGCACCAGAGAAGTCATCTGCAACGCGGGTGCTGGAGCTGCTGCCGGGGCTATTGCGGCTACATTTGTTTGTCCGCTGGATGTAATCAAGACGAGACTACAAGTTCATGGTCTTCCTCCTGGGCACAAAGGTAGTGTCATCATCACAAGCTTGCGGGATATAGTCAGGAATGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATAATAGCATTACTTCCAAACTGGGCAGTTTACTTCTCAGTTTATGGTCAACTGAAAGGCCTTTTCTCTTCACAAGATGGTTGGAACCAATTATCAACTGTTGAAAATATGGTAGCTGCTGCTGGTGCTGGGGTAGCAACATCAATTTCAACAAATCCGTTGTGGGTTGTTAAGACTAGACTCCAAACACAAGGAATGAAGTCCGATGTTGTTCCGTACAAAAGCATTCTTTCTGCTTTAAAGAGGATAATGCACGAGGAAGGCATACGAGGCCTGTATAGTGGCATAGTGCCTTCCTTGGCTGGTGTAAGTCATGTTGCAATTCAATTCCCTGCATATGAAAAGATCAAGTCATACATGGCCAAAAAGGATGATACAACTGTTGATAAACTTGGTCCAGGAAGGGTTGCCGTTGCATCCTCAATTTCAAAAGTCATTGCGTCTGTAATGACTTATCCACATGAGGTGGTACGTTCGAGGCTGCAGGATCAAGGCCAGGCGAAAAGTGCCAGGGTCCGGTATGCTGGGCTTGTTGACTGTTCTAGGAAAGTGTTCCATAGCGAAGGCCTTCCTGGCTTCTATCGAGGTTGTGGGACAAATTTACTAAGAACAACTCCATCAGCTGTAATTACATTCACCAGCTTTGAGATGATACACAGGTTTCTGCAACGTGTTGTACCTCAGGATATGGGGCACTCACGAGGGTCTCATGCACCAGATGACCTTAGCAAGCCCCAGCCAAAAGACAGTAACATAAAATTACCATCTGAGTCTAAGACAGCTTTAAATGAAAAGCAGCTATCTAGACACTGA 1059 0.4514 MSSNGKSHGGNQSTREVICNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPGHKGSVIITSLRDIVRNEGFRGMYRGLSPTIIALLPNWAVYFSVYGQLKGLFSSQDGWNQLSTVENMVAAAGAGVATSISTNPLWVVKTRLQTQGMKSDVVPYKSILSALKRIMHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAKKDDTTVDKLGPGRVAVASSISKVIASVMTYPHEVVRSRLQDQGQAKSARVRYAGLVDCSRKVFHSEGLPGFYRGCGTNLLRTTPSAVITFTSFEMIHRFLQRVVPQDMGHSRGSHAPDDLSKPQPKDSNIKLPSESKTALNEKQLSRH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1554 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Lele50g1554 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Lele50g1554 352 SUPERFAMILY Mitochondrial carrier 16 299 IPR023395 -
Lele50g1554 352 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 309 IPR044712 GO:0006862|GO:0055085
Lele50g1554 352 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Lele50g1554 352 MobiDBLite consensus disorder prediction 311 352 - -
Lele50g1554 352 Pfam Mitochondrial carrier protein 17 106 IPR018108 -
Lele50g1554 352 Pfam Mitochondrial carrier protein 214 306 IPR018108 -
Lele50g1554 352 Pfam Mitochondrial carrier protein 112 205 IPR018108 -
Lele50g1554 352 Gene3D Mitochondrial carrier domain 108 314 IPR023395 -
Lele50g1554 352 Gene3D Mitochondrial carrier domain 3 107 IPR023395 -
Lele50g1554 352 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lele50g1554 352 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Lele50g1554 352 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Lele50g1554 352 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Lele50g1554 352 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Lele50g1554 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1554 Lele-ChrLele50 20736783 20739702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1554 1 315 Chloroplast and Mitochondria Gene Families AT1G25380 69.279 4.05e-148 421