Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1550 ATGATTTCACTTTACAGGTCTCGCTTCCTCTTGTATTCTGAACTGGTACTGCTATTCCTAGCTGGACATGGAAATGGAAACCATGAAAAGTGTCCTCAATCATTTGATTGTGGAGAACTTGGGAAGATCCACTTCCCTTTCACCAAGGCTGAAACACAGGATTGTGGCTTAATGATGATACATGGTTGTGATGATCCATCTTCGAACAAAACGATTCAACTAGAGAAGAATGGAAGGCCATTAAAGCTTACAAGCATCATTCAGCAGGAGGATAATTCTATTACTGTTACTGATATAGATCTGCAAAAGACGTTGAAATCCAAAACTTGTCAAGTTTTCAACAAGAATATCACTCTTCCTCATGGCTCTCCTTTGGTTTCTTTTCATATCAAACATAGCATAACCTTGTTCAGATGTGATCACAGCCTCATCATCGACCCTCCGGCTAGTGTTCATAATTATACCTGCCATAACTATAATATCTATCATTACCACTTGCACAAGCATTATCCTCTTAACCATTATTACCGAAGATCTTTCTCAGCTTGCTCTATTCTTCTGCTTCCAAGTAAACACCAGAATCATACCAAAGACCTTTTCTCATTCTTAACTGCTCAAATGGTTATTCAAGTACAATTATCTGATGCTTGTGATAAGTGTTACAACCAACTAGGTGGCCAATGTCGACTAGACAGCTATAGGAACTTCTATTGTCACAGAGAGAAAACTGGAAAAACTGTGCTCATTGCAACAACAGTAGCTTCTTCTGTGGGACTCGTTATGCTATTGTTCCTGGCCTTTTGCTTTAGAAGAAAGCTTCTTGCTCTTGCTTCATCAAGTCTCTTTTGGAGGAAAAAGCATCAAACCCATCAAATAACTGAAGCCTCTCTTAAACAACAGGGACCAATCTCTTCCAGAAAGTACAGTTACTCTGAGATAAAGAGAATCACAGACTGTTTCAAAATCAAATTAGGCAAAGGAGGATATGGAACTGTATATAAAGGGAAGCTACCAAATGGGAATCTTGTCGCAGTGAAAGTGCTAAGTCAACTAAAATGTACCGACGAGGAATTCATTAATGAAGTTGCAAGTATCAGCAAGACATCTCATGTTAACATTGTTAGCCTTCTAGGATTTTGTTTCCAAGGTTCCAAAAGAGCTCTAGTTTACGAGTTTATGTCCAATGGATCTCTCGACAAATTCATATATGAGAAGAAGAATTGCAACATGGGTGAACAACGCCAATTGGACTGTCAAACTCTATATAATATTGCACTTGATGTTGCTAGAGGTTTAGAGTACTTACACAGGGGCTGCAACAAGACCAAAATCCTACATCTTGACATAAAACCTCATAACATCCTACTCAATGAGGAGTTTCGCCCAAAAATTTCGGATTTTGGACTCGCTAAAGTACTTCCAATAAAAGATCGGTTAGTGTCCATTTTGGAAGCAAGGGGTACTGTAGGATACATAGCTCCTGAAGTATTTTCGAGGAACTTTGGCAACGTATCTCACAAATCGGATGTCTTCAGTTATGGAATGGTGGTCCTAGAAATGGTAGGAGGAAGAAGGAACCTGAGTGTTGAAGTTGATCGTTCTAGTGAGACATATGTTCCACAATTGATTTATAAGCGCCTTGAACTGAATCAAGAACTAGAACTGGGGTCCAATATTAAGAACGATAGTGATAAAGAAATGATGAGAAAAATGACAATGGTGAGCTTATGGTGCATACAAACTGATCCTTCAATGAGACCAGAAATGAGTAAAGTAGTGGAGATGTTAGAAGGAAGCTCGGAATCATTGCAAGTACCTCCTAAGCCATTTTTCTTTTCTTCTTCAGCATCTTATGTTCATTCCACATCTAAAACATGTGAGATTGTGCAGTTGTAG 1896 0.3882 MISLYRSRFLLYSELVLLFLAGHGNGNHEKCPQSFDCGELGKIHFPFTKAETQDCGLMMIHGCDDPSSNKTIQLEKNGRPLKLTSIIQQEDNSITVTDIDLQKTLKSKTCQVFNKNITLPHGSPLVSFHIKHSITLFRCDHSLIIDPPASVHNYTCHNYNIYHYHLHKHYPLNHYYRRSFSACSILLLPSKHQNHTKDLFSFLTAQMVIQVQLSDACDKCYNQLGGQCRLDSYRNFYCHREKTGKTVLIATTVASSVGLVMLLFLAFCFRRKLLALASSSLFWRKKHQTHQITEASLKQQGPISSRKYSYSEIKRITDCFKIKLGKGGYGTVYKGKLPNGNLVAVKVLSQLKCTDEEFINEVASISKTSHVNIVSLLGFCFQGSKRALVYEFMSNGSLDKFIYEKKNCNMGEQRQLDCQTLYNIALDVARGLEYLHRGCNKTKILHLDIKPHNILLNEEFRPKISDFGLAKVLPIKDRLVSILEARGTVGYIAPEVFSRNFGNVSHKSDVFSYGMVVLEMVGGRRNLSVEVDRSSETYVPQLIYKRLELNQELELGSNIKNDSDKEMMRKMTMVSLWCIQTDPSMRPEMSKVVEMLEGSSESLQVPPKPFFFSSSASYVHSTSKTCEIVQL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1550 631 SUPERFAMILY Protein kinase-like (PK-like) 306 622 IPR011009 -
Lele50g1550 631 FunFam S-receptor-like serine/threonine-protein kinase 285 392 - -
Lele50g1550 631 Gene3D Transferase(Phosphotransferase) domain 1 393 606 - -
Lele50g1550 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Lele50g1550 631 PANTHER RUST RESISTANCE KINASE LR10-RELATED 288 616 IPR045874 GO:0004672
Lele50g1550 631 Pfam Protein kinase domain 323 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1550 631 Gene3D Phosphorylase Kinase; domain 1 277 392 - -
Lele50g1550 631 SMART serkin_6 318 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1550 631 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Lele50g1550 631 FunFam PR5-like receptor kinase 393 608 - -
Lele50g1550 631 ProSiteProfiles Protein kinase domain profile. 318 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1550 Lele-ChrLele50 20712749 20715144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1550 209 609 Receptor kinase-like Gene Family AT5G38260 47.445 5.16e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele50g1550 Pkinase 1.6e-46 CL0016