Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1538 ATGGAGTGCCTCTTACCTACTTCCTCTAGATTTCAGCTTATTCGAGATGCAAATTTTACGTATTTCGCAGAATCAACTAATCTCATGGTTTTATTTGATCACTCCAGTTTATGTGCCGTTATAGCCCCTACTGCTTCAAAGTTGGAAGTAATACTCCAGACTTGTTGCTCCCTTAAAAAGAAGGTTGGAACACCTTTCAATGGACGCATGAACAAGGAAACTAATATAAGAGAATTGGAGCAAATGGGCACATCAGCAATGAACAAGGAAAAATTGAATGATGGTAAATGCGGTAATCGTAGTATGAGTGAACGGTGGAAGCAAAAGGAGTTATTCCTTCTGATAGCTTATGCATTTGTTTTCTATGCCATCATCATCCGCCGGTCTCTTCAACTTTCTAATGATTACTACCAACGGCTCTATGGCTTACGTCCAGGATGGCTCACACCTCATCCCCTCAATGATGTCTCAGATGCCCAATGGAGGAACTTTCGAGGAAATATACCTGTTCTTACTATTGTCTTTGGAATTTTCACTCTACTGGCGAAATTGATGAGATCGTTCTTTAGTTTAGAACTGAGGGGAATGTCCACTGTCTGGCTTTTGTTTTCTTTGATATACCTATCATATCTGCATGGAGCGTGCATCGTTTTTGTCCTATCAATAGCCACAGTTAACTTTCTTCTGGTAAAGATATTTGCGCGGAAGAAGTATTTTACCCTCGTAGTTTGGAGTTATAACTTATTTTTTCTTCTTTGCAATCGTGTTTATGGAGGATATCCATTCTCTACATTTGGGAAACAATTGGCATTTTTGGACAACTACCGAGGCACTTTTAGATGGCACATATGTTTCAACTTTGTTGTTCTGCGTATGATAAGCTTTGGATTGGATTATCATGGGTTAAATCAAGTGTCTCATTTTGATCAGGAGAAGCATTATCAACGTTGCCATATTTGTAAATTGGGAAAACCTTGCTACCAAATTTTGCAGGAGAGAAGTTTGCCGAGTGACAAGTTCAGATATACCACATACCTTTGTTATCTGCTATATGCGCCACTTTACATTGCTGGTCCAATAGTTAGCTTCAATGCTTTTGCCTCTCAGCTAGATGTTCCCCAGAGTTTAAACAGAAATGTGATATCCTATGGTTTCCGCTGGGTATTGAGTCTTCTTCTTATGGAGTTAATGACACATATATTTTATTATAATGCCTTTGCAATCAGTGGTTTGTGGAAGCACTTGTCTCCTATGGATGTCTTCATCATTGGATATGGGGTCTTAAACTTCATGTGGCTAAAATTCTTACTGATCTGGCGCTATTTCCGGTTCTGGTCACTGATAAATGGCATTGAGGTTCCAGAGAATATGCCAAAGTGTATCAATAATTGCCACAGCTTGGAGGGCTTTTGGAAAAATTGGCATGCTTCCTTTAACAAGTGGCTTGTGAGATACATGTACATTCCTCTTGGGGGGTCTCGAAAGAAGCTACTCAATGTATGGGTCATATTCACCTTTGTTGCCATCTGGCATGATTTGGAGTGGAAGCTTCTTTCATGGGCCTGGTTGACATGTTTATTCTTTATCCCTGAGTTGGTGCTGAAGTCAGCAGCAAAGGCATTTCAGGCTGAAAGTGGTTTTGGGGAATATTTATTTCGTGAGCTCAGTGCTGTTGCTGGTGCCATCACAATTACTTGTCTCATGGTGGCAAATCTGGTTGGCTTTGTTATTGGACCTGGAGGCATCAACTGGCTGCTTTCTTCTTTCATTCAAAAAGAAGGACTGCCAGTTCTTGGTGGCTTACTTCTCTCGTTTTATGTAGGAACGAAGCTTATGTTCCACATAGCTGAAGCAAAGCAAAGTCGAAGGAAGGAGGGACGAATCGACATCGCAGATTTCTCTAGGCGATGTTATCAAACTGCTCTTGATTTTTCATGTCAACCAAAATCAAAGACAAAGGAAAAAGAACAAGTAAATCTGATTGGAAATGGATTAGACGACATAGTTGACAATAACCTCTCCATCATTAGCAGTGTCATTTCAAAGGCGACGGAGATGCTTTGTGGAGATAGTAGACGAAGAAGTGAAGATATGGAGAAAAATTCGTCATCCAGCATTCAAGAATTCATGTCTTTCTTCAATGATTCCTTCTCCGACGATCAACCCCTTAATAATCTTAATCCACAGCCTGTTCTTTATCAAGATGAAGAAACTTTGCCCATCTCAGAAACCTTGCTGGATTCTTCTCCTCCAATATTTTCTGCACCTTCTTCTGCTCATCACAAGAACAAGAGGAAGAGAAACAGTGAAAGACTTGAAGAGAAAGCAAAAGATGTCATCCATGTAAGAGCCAAAAGAGGCCAAGCAACTGATAGCCACAGTTTAGCTGAAAGGACAATGGGGATGTCAGTAATGTTAGATGTGATCATAGATTATGTTCAATCTCTGCAACAACAGATTGAGTTTCTTTCCATGAAGCTTACAGCAGCAACCATGCATTATGATTTCCATCCTTCTCAGTTCAATGTCACTGAAACCTTCCAGGAGAATACAGTGCACTCCCTTTCAAATGGCTCACCAATTAATGACAGCTGGTCCAGTCCAGATCAGAGAAGAGGGGGCCATGCATACAAAACTATCACATTAAAAGAAATCCAACTTCCTAGAAAGGATCCATTTCTCATGCATTGCCCTGACAGCGACAACATGTATGAAGTTTGA 2721 0.4043 MECLLPTSSRFQLIRDANFTYFAESTNLMVLFDHSSLCAVIAPTASKLEVILQTCCSLKKKVGTPFNGRMNKETNIRELEQMGTSAMNKEKLNDGKCGNRSMSERWKQKELFLLIAYAFVFYAIIIRRSLQLSNDYYQRLYGLRPGWLTPHPLNDVSDAQWRNFRGNIPVLTIVFGIFTLLAKLMRSFFSLELRGMSTVWLLFSLIYLSYLHGACIVFVLSIATVNFLLVKIFARKKYFTLVVWSYNLFFLLCNRVYGGYPFSTFGKQLAFLDNYRGTFRWHICFNFVVLRMISFGLDYHGLNQVSHFDQEKHYQRCHICKLGKPCYQILQERSLPSDKFRYTTYLCYLLYAPLYIAGPIVSFNAFASQLDVPQSLNRNVISYGFRWVLSLLLMELMTHIFYYNAFAISGLWKHLSPMDVFIIGYGVLNFMWLKFLLIWRYFRFWSLINGIEVPENMPKCINNCHSLEGFWKNWHASFNKWLVRYMYIPLGGSRKKLLNVWVIFTFVAIWHDLEWKLLSWAWLTCLFFIPELVLKSAAKAFQAESGFGEYLFRELSAVAGAITITCLMVANLVGFVIGPGGINWLLSSFIQKEGLPVLGGLLLSFYVGTKLMFHIAEAKQSRRKEGRIDIADFSRRCYQTALDFSCQPKSKTKEKEQVNLIGNGLDDIVDNNLSIISSVISKATEMLCGDSRRRSEDMEKNSSSSIQEFMSFFNDSFSDDQPLNNLNPQPVLYQDEETLPISETLLDSSPPIFSAPSSAHHKNKRKRNSERLEEKAKDVIHVRAKRGQATDSHSLAERTMGMSVMLDVIIDYVQSLQQQIEFLSMKLTAATMHYDFHPSQFNVTETFQENTVHSLSNGSPINDSWSSPDQRRGGHAYKTITLKEIQLPRKDPFLMHCPDSDNMYEV 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1538 906 MobiDBLite consensus disorder prediction 853 869 - -
Lele50g1538 906 MobiDBLite consensus disorder prediction 750 773 - -
Lele50g1538 906 Pfam MBOAT, membrane-bound O-acyltransferase family 288 539 IPR004299 -
Lele50g1538 906 PANTHER ACYLTRANSFERASE 107 622 - -
Lele50g1538 906 MobiDBLite consensus disorder prediction 853 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1538 Lele-ChrLele50 20578551 20590606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1538 774 856 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 53.333 8.63e-26 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1538 50 20578551 20590606 Lele51g1299 51 8709690 8717009 hybridization
Lele50g1538 50 20578551 20590606 Lele52g1496 52 18949802 18957846 hybridization