Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1511 ATGGCATCCGATGCACATGGCTCCCGTCGTAAGCACCGGCGCTCATCTTCTCGCGAAGAAGTCGAGCGATCTTCGAAGCGTCACAAGCACCGCCACCATGGGCACCGCCATCATCGGCACCGCCACGGTAGTAGGAAACACGAAGAAGTTGAACTTGATTGCGAAACTGTTGATGAGGTTCCTTCTCCAACTCTTGCTCCTAATTTTGATCCGAAGATCCCTAGGCCTGATGATGATGTGGAGGAGGGGGAGATTCTCGAAGAGCAGGGTTCTGGTGGCCGAGATGGTGAGATTGGAAAAAAGCCTACGGAGTCTGATGCTGAGTCTGGTGAAATTATGGCCGCGGGAGGTCGAGGTATTCGATCTGATAATTCAAATCCGGTACCTTTCACTGAAGAGATGTTGCATCGGAAAGATGCCAATCCATCCAAAGAGACTGTAGGAATCAATGCTCAAGTTTCACAAACTAATAATGAGGATCTCCGCAATGGTAGAGTTGTTATTCCAGTATTGGATGGAGAAGATGATACCAGCCATCAGAGAATCACTGGTTATAGTAGAAATGAAGTTGATGGTTCTTCTACTCATTCAAGTGCTGAGTCTCTAGATGGTGAGCATGCTAGAGCTAGTTCAGATGGTTTGGGCAATGGGTATTGGGATAGTAAATCTTCTAAAGAGGATAAATGGCAGCATGGGGAGCTCGGATGTTCTAAAGGAAATGAGAAGCTGAAAGGTGACTGTGATAATGAAGGACTGGAGGTTAATGGAGGCAAAGTAAGGATTCATAGAAGGAACTCCTCCCCTGAAAGTGGAGGCGGCAAGAATAGGACCAGGGAAAGCTCACCTAATCATAGACGTAGGAGTCAATCCAGATCAAGTGGTCATACTCATAGTGTAATGGAAGAATATGCTCATTCCAGGAGAAGGAATGATGAGGAAAGAATTGGGGACTATGGCAGGGAGCGTGAACATGCCAGTAGGGATTTGATGTCAGGTGATAGAAGGGAGTGTAGTTCTAGTTATTACAGTCGGGAGGTCCGAGATAGAGATAGGAGCAAGGACAGGGATGCGGATAGGTACCTAAAAAGGGAAAAGGAACAAGAAAGGAGCCGAAATAGGGAGGATGACCGTGTGCATAGGAGGGAAAAAGAACCTGAAAGGAGTCATGAGAAGGATAGAAGGGATGTGGAAAAAGATAGGAGCAGGGGAAGAGAGGTTGACAGGGATAGAAGAAGAGAAAAGGAGCGAGATAGAGATAGGAGCTGGGAGATAGGGGCTGAGCGGGATAGAAGTGATACGGGAAGAGGGAGGAGTAGGGACAGAGCAAGGGTTGGAGAGAGAGATAGAGTCCGGGAGAGTGAAAGGGATGATAAGCATCGAGAAAGAGATAGGATTAAGGAGAGGGAGAGGCATAAGGATAGAAACACTCTTGATAAAGATAAAAATCTGGGTTATGACCATGGTCACGAGAGCCGGGACAGAGATATACGCTCTAGGCATTCTAGACATGAAGAACCAGAAAGCTATCGGGAGATACAGAGAAATTCTGAGTCTGTGGAAGTTGATAACCCTATGGACAGAGGTGAGCATGAACAAGATGACTTATATGAGACTGTCACGTTACAATTTGCTGAACAAGAAGAGGAAGATCTCAATAGAATTAAGGAGGAGAGTAGAAGGAGGAGGGAAGCAATCTTAGAGAAATATAAAAAGCAGCAACCACAGCAGCATCAACAAGCAGAACAAACTTCTGAAAATAAAGAAAAAGATAAGGATCCTTTGAATATTCTGGCTGCTGTTTTGGAAGCTCCTGATGCTAAGAATGATGGAGTTGATGTTTTTGAAGCGGAACCATCTTTCACTGTTGGTAAATCTCCTCGAGAAAATGGAAATGATACATCTGAAAAGATCCCTGGTGTTGCTAGGGGCTTGGGAGAGGGTACTCCAAAGAGTGAAAGATCCGATGACAAGTTTTGTGATGATATATTTGGTGAGACACCAACAGGAGTTCGCAAATCGGGCAAGGGGGATGGATTGCGTGTTGACAGGGGTGGATTGCACGACAATTGGGATGATGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGTCGATATGAAGTTATTGCAGCTCATGGTAGAGGTGTCTTTTCAACGGTTGTTCGGGCAAAGAATCTCAAGGCTGGTAATGGTGAGCCAGAAGAAGTAGCTATAAAAATTATTCGCAATAATGACACTATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCGAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCCCTTCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCGTATGGGAAACAACTTTTTATGGCACTGAAGCATCTTCGGAACTGTGGCGTTCTTCATTGTGATATAAAGCCAGACAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTTACGCCATACCTTGTGAGTCGTTTTTATCGTGCCCCTGAAATAATACTTGGCTTGCCATATGATCATCCGTTGGATATCTGGTCTGTAGGCTGTTGTTTGTATGAACTCTATAGTGGAAAAGTTCTTTTCCCAGGTTCTACTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTTCGCAAGGGAGCGTTTATTGATCAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAAGAGGATCCAGTGACGAAGAAGGCTATAAAGCGGTTGATTCTCAACATAAAGCCCAAAGATATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGATCCAAAGATGTTAGCCAATTTCAAAGATCTTCTGGACAAGGCTTTTGTCCTGGATCCAGAGAAGAGGTTGACAGTCTCACAAGCATTAAGCCACCCATTCATCACTGGCAAGTGA 3084 0.4429 MASDAHGSRRKHRRSSSREEVERSSKRHKHRHHGHRHHRHRHGSRKHEEVELDCETVDEVPSPTLAPNFDPKIPRPDDDVEEGEILEEQGSGGRDGEIGKKPTESDAESGEIMAAGGRGIRSDNSNPVPFTEEMLHRKDANPSKETVGINAQVSQTNNEDLRNGRVVIPVLDGEDDTSHQRITGYSRNEVDGSSTHSSAESLDGEHARASSDGLGNGYWDSKSSKEDKWQHGELGCSKGNEKLKGDCDNEGLEVNGGKVRIHRRNSSPESGGGKNRTRESSPNHRRRSQSRSSGHTHSVMEEYAHSRRRNDEERIGDYGREREHASRDLMSGDRRECSSSYYSREVRDRDRSKDRDADRYLKREKEQERSRNREDDRVHRREKEPERSHEKDRRDVEKDRSRGREVDRDRRREKERDRDRSWEIGAERDRSDTGRGRSRDRARVGERDRVRESERDDKHRERDRIKERERHKDRNTLDKDKNLGYDHGHESRDRDIRSRHSRHEEPESYREIQRNSESVEVDNPMDRGEHEQDDLYETVTLQFAEQEEEDLNRIKEESRRRREAILEKYKKQQPQQHQQAEQTSENKEKDKDPLNILAAVLEAPDAKNDGVDVFEAEPSFTVGKSPRENGNDTSEKIPGVARGLGEGTPKSERSDDKFCDDIFGETPTGVRKSGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVIAAHGRGVFSTVVRAKNLKAGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYGKQLFMALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYSGKVLFPGSTNNDMLRLHMELKGPFPKKMLRKGAFIDQHFDQDLNFLATEEDPVTKKAIKRLILNIKPKDIGTIIAGSPGEDPKMLANFKDLLDKAFVLDPEKRLTVSQALSHPFITGK 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1511 1027 MobiDBLite consensus disorder prediction 648 662 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 298 536 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 621 676 - -
Lele50g1511 1027 SMART serkin_6 709 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1511 1027 FunFam Serine/threonine-protein kinase PRP4 homolog 769 1025 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 183 200 - -
Lele50g1511 1027 Gene3D Transferase(Phosphotransferase) domain 1 769 1025 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 145 162 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 87 107 - -
Lele50g1511 1027 CDD STKc_PRP4 708 1024 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lele50g1511 1027 Pfam Protein kinase domain 710 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1511 1027 ProSiteProfiles Protein kinase domain profile. 709 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1511 1027 MobiDBLite consensus disorder prediction 221 269 - -
Lele50g1511 1027 PANTHER DUAL SPECIFICITY PROTEIN KINASE 393 1025 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 25 44 - -
Lele50g1511 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Lele50g1511 1027 Coils Coil 541 564 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 564 592 - -
Lele50g1511 1027 MobiDBLite consensus disorder prediction 1 536 - -
Lele50g1511 1027 FunFam serine/threonine-protein kinase PRP4 homolog 680 768 - -
Lele50g1511 1027 SUPERFAMILY Protein kinase-like (PK-like) 696 1026 IPR011009 -
Lele50g1511 1027 Gene3D Phosphorylase Kinase; domain 1 680 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1511 Lele-ChrLele50 20251686 20258210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1511 662 1026 MAP Kinase Gene Family AT2G18170 30.709 1.91e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele50g1511 Pkinase 5.6e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1511 50 20251686 20258210 Lele50g1511 50 20251686 20258210 ECH
Lele50g1511 50 20251686 20258210 Lele51g1324 51 8979908 8988524 hybridization
Lele50g1511 50 20251686 20258210 Lele52g1464 52 18631840 18638403 hybridization