Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1472 ATGAAATGCGCGTTATCTGTGGTTCTTATGCGCCTGGACATTGAGGATTTTGGCCGGCGAAAAATGGCTACTTTAGTTCAAGTTTTCTGGTTGTGGAAAAAAATGAAAAGTGGAAAAAGAAGGAAGCTGCATTTCAGCAAGATCTACTCATTCGCGTGCGGGAGACAATCATTTGAGGACGACCATTCACAGATTGGGGGACGAGGTTATTCCAGGGTGGTCTTCTGCAATGAACCAGACATCCTTGAAGCTGAAATTCGAGATTATGCAGATAACTCTGTGAGGTCTACAAAATATACTCTTGCTACTTTCTTGCCTAAGTCACTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTCTATTTCTTAGTTACTGGGACCTTAGCCTTCACCCCACTTGCTCCCTACATAGCGGTTAGTGCCATCGTTCCTCTGATCATCGTTATTGGGGCATCAATGATTAAAGAAGCTATTGAAGATTGGCGGCGGAAGAAGCAGGATATTGAGGTGAACAATAGACTGGTTAAAGTTCATAAAGGTGATGGTGTATTTGAATATACTGCATGGAAGAATCTGAGGGTGGGAGATATAGTGAAGGCAGAGAAGGATGAATTCTTTCCAGCAGACCTCCTATTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTTGAGACCATGAATTTGGATGGGGAGACAAATTTAAAGCTGAAACAAGGGTTGGAGGTGACTTCTTCTATGCACGAAGATCTCTACTTCCGTGATTTTAAAGCTACAGTTAAATGTGAAGACCCAAATGCTAACTTATACTCTTTTGTTGGGAGCATTGAGTTTGAAGATAAACAATATCCCCTTTCTCATCAGCAACTTCTCCTGAGAGATTCTAAACTCCGTAATACAGACTTCATATTTGGAGCTGTCATTTTCACTGGTCATGACACCAAGGTTATTCAAAATTCTACTGATCCCCCTTCAAAGAGAAGCAAGGTTGAGAGGAAGATGGATAAAATAATCTATTTCTTGTTTTGTATTCTTTTTCTAATGGCATCTGTTGGATCTATTTTCTTTGGAATTTTAACTGAAGATGACTTGGAAAATGGGTTGATGAAAAGATGGTATCTCAGACCAGATAATTCTACAATTTTCTTTGATCCAAAAAGATCACCATCTGCTGCAATTTTTCATTGTTTGACAGCCTTAATGTTATATGGCTTCTTTATTCCAATCTCCTTGTATGTGTCAATAGAAATTGTTAAAGTCCTTCAGAGCGTCTTCATCAATCAAGATATCCATATGTACCATGAGGAGGCAGACAAACCAGCCCATGCCCGTACTTCAAATCTGAATGAAGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGTACTTTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCTGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTGGAAAAAGCTATGAATAAAAAAAGTGGTTCACCATTGATTCATGAGCAAGATAGTGGATCGGATGATGTCAGGGATTCTTCTGTTACAAAAGCCCCCATTAAAGGTTTTAATTTTATAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTCATGCGGATGTCATCCAGAAGTTTTTTCACTTGCTGGCAACCTGTCATACGGCCATCCCTGAAGTGGATGAAGACACTGGAAATATCTCATATGAAGCCGAGTCCCCTGATGAAGCAGCCTTTGTGATTGCAGCAAGAGAACTTGGCTTTGAATTCTACAAAAGAACTCAGACAAGTTTATCAATGTATGAGTTGGATCCTGTTTCTGGCAAAAAGGTCGAAAGGTTGTTTAAGCTTCTCAATGTTTTAGAATTCAACAGCTTGAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGCAAAATTTTTCTATTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTGGCCAAGAATGGGCGGGAGTTTGAAGAGAAAACCCTTGAACATGTGCAAGAGTATGCTGATGCAGGTCTAAGGACCTTGATATTGGCCTATCGTGAACTTGATGAAGAAGCATACAGGGACTTCGATGAAAAATTTTCTCTGGCCAAGAATTCAGTTCGTGCAGATCGAGATACACTGATTGATGACGTATCAGATAAGATTGAGAGGAACCTAATCCTTCTTGGTGCCACTGCAGTAGAGGACAAACTCCAAAATGGGGTTCCTGATTGCATCGACAAACTTGCTCGGGCGGGAATCAAGATCTGGGTTCTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTATGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATCTGGATTCTCCAGATATTCAAGCATTAGAAAAGGTTGGAGACAAGATTGCTATTGCCAAGGAATCCAGGGAGAATATCCGATTTCAGATATCTGAAGCTACTGCACAACTTGCTGTTTCCAGAGGGACTTCTCAGCAAGCATTTGCTCTGATCATCGATGGAAAATCACTTACATATGCTCTTGACGATGACATGAAGAACATATTTCTGGAGCTTGCACTTAATTGCGCGTCAGTTATCTGCTGTCGGTCATCACCAAAGCAGAAAGCACTAGTTACCAGACTTGTTAAATCTGGAACTGGCAAAACGACACTAGCCATCGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATTAGCGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGCGATATTGCAATTGCCCAGTTCAGGTACTTGGAACGGTTACTCCTCGTGCATGGACATTGGTGTTACCGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAATGTTACTTTTGGATTCACCCTCTTCTTGTATGAAGTGTATGCATCGTTCTCTGGAACACCTGCGTACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTCTCTTCTCTTCCTGTTATTGCTCTTGGCGTATTTGACCAGGATGTTTCTGCCCGGTACTGTCTTAAGTTTCCTCAGTTATATCAACAAGGAGTGCAGAATGTCCTCTTTAGTTGGCGCCGAATACTTAGCTGGATGCTGAATGGATTCATAAGTGCAATCATAATTTTCTTCTTCTGCACAAAGGCGATGGAGCTTCAGGCCTTTGATAAGGAGGGAAGAACAGCCGGCAGGGATATCCTCGGAGTAACCATGTATACCTGCATTGTATGGGTTGTAAACTTGCAGATGGCACTTGCCATAAGTTACTTCACCATGATTCAACATATTTTCATCTGGGGCACCATTGCTTTCTGGTATCTTTTCCTCCTGATATATGGAGCAATGCCGCCGGGGTTTTCCAAGAATGCCTACTATGTCTTCATTGAAACGCTGGCCCCATCTCCCATGTTCTGGCTTGTGACTTTCTTTGTGGTGATCTCAACCTTAATACCTTACTTCTCTTACTCAGCACTTCAGATGAGGTTCTTTCCCATGTACCATGAAGTGATACAATGGTTAAGGTATGAGGGGAAGGCGAATGATCCAGAATATTGCGCCTTACTGAGACAGAGATCATTGGGGCGAGTAACCGTCGGTTCAACAGCACGCTTAGAAGCTAAGAAGGCTAACCACAATAAAACCAGAACTTCTAAACATAGATGA 3699 0.4155 MKCALSVVLMRLDIEDFGRRKMATLVQVFWLWKKMKSGKRRKLHFSKIYSFACGRQSFEDDHSQIGGRGYSRVVFCNEPDILEAEIRDYADNSVRSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTPLAPYIAVSAIVPLIIVIGASMIKEAIEDWRRKKQDIEVNNRLVKVHKGDGVFEYTAWKNLRVGDIVKAEKDEFFPADLLLLSSSYEDAICYVETMNLDGETNLKLKQGLEVTSSMHEDLYFRDFKATVKCEDPNANLYSFVGSIEFEDKQYPLSHQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSKVERKMDKIIYFLFCILFLMASVGSIFFGILTEDDLENGLMKRWYLRPDNSTIFFDPKRSPSAAIFHCLTALMLYGFFIPISLYVSIEIVKVLQSVFINQDIHMYHEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMNKKSGSPLIHEQDSGSDDVRDSSVTKAPIKGFNFIDERIMNGNWVNEPHADVIQKFFHLLATCHTAIPEVDEDTGNISYEAESPDEAAFVIAARELGFEFYKRTQTSLSMYELDPVSGKKVERLFKLLNVLEFNSLRKRMSVIVKDEEGKIFLFCKGADSVMFERLAKNGREFEEKTLEHVQEYADAGLRTLILAYRELDEEAYRDFDEKFSLAKNSVRADRDTLIDDVSDKIERNLILLGATAVEDKLQNGVPDCIDKLARAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIIIHLDSPDIQALEKVGDKIAIAKESRENIRFQISEATAQLAVSRGTSQQAFALIIDGKSLTYALDDDMKNIFLELALNCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPQLYQQGVQNVLFSWRRILSWMLNGFISAIIIFFFCTKAMELQAFDKEGRTAGRDILGVTMYTCIVWVVNLQMALAISYFTMIQHIFIWGTIAFWYLFLLIYGAMPPGFSKNAYYVFIETLAPSPMFWLVTFFVVISTLIPYFSYSALQMRFFPMYHEVIQWLRYEGKANDPEYCALLRQRSLGRVTVGSTARLEAKKANHNKTRTSKHR 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1472 1232 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
Lele50g1472 1232 Pfam Cation transport ATPase (P-type) 572 659 - -
Lele50g1472 1232 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 532 734 IPR023299 GO:0000166
Lele50g1472 1232 FunFam Phospholipid-transporting ATPase 575 733 - -
Lele50g1472 1232 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 1176 IPR023298 -
Lele50g1472 1232 Pfam Phospholipid-translocating ATPase N-terminal 75 138 IPR032631 -
Lele50g1472 1232 Pfam Phospholipid-translocating P-type ATPase C-terminal 926 1176 IPR032630 -
Lele50g1472 1232 Gene3D - 577 732 IPR023299 GO:0000166
Lele50g1472 1232 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 870 981 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele50g1472 1232 CDD P-type_ATPase_APLT_Dnf-like 91 1047 - -
Lele50g1472 1232 Gene3D - 733 938 IPR023214 -
Lele50g1472 1232 SFLD Haloacid Dehalogenase 440 949 - -
Lele50g1472 1232 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 62 1189 - -
Lele50g1472 1232 Gene3D - 152 320 - -
Lele50g1472 1232 SFLD p-type atpase 440 949 IPR044492 -
Lele50g1472 1232 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Lele50g1472 1232 PRINTS P-type cation-transporting ATPase superfamily signature 898 917 - -
Lele50g1472 1232 FunFam Phospholipid-transporting ATPase 733 938 - -
Lele50g1472 1232 MobiDBLite consensus disorder prediction 496 515 - -
Lele50g1472 1232 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 89 1183 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele50g1472 1232 SUPERFAMILY Calcium ATPase, transduction domain A 174 317 IPR008250 -
Lele50g1472 1232 FunFam Phospholipid-transporting ATPase 150 320 - -
Lele50g1472 1232 SUPERFAMILY HAD-like 453 953 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1472 Lele-ChrLele50 19754241 19761785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1472 43 1220 Primary Pumps ATPases AT1G68710 74.565 0.0 1900