Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1465 ATGGCCATCACTCTTGCAATAATCTCCAGATTTTCTATTCATCTGTTCAGCATGCTCTTCAACTTCCTCAAGCTAACTTCTTCCCATTTCAAATGGGGTTTAGAGTTCCTTCTCTACCACTCATTTTACAGCCTTCGTGTTCATCATCATCATCAACCTCTTGAAGAGTTTCAGATGATTACAGAAGATCGAGTCGAAATATGGCATCGTCATCGTGAAGGAGGAGAAGAAGAAGAAGTGGATTGTGCAGTGTGTCTGAACAAGATTGGTGAAGGAGAAGAAGTTAAGGTGTTGAGGTGTGAACATGTTTTTCATAGGGATTGCTTGAATCAGTGGGTTGGATTTAGGAACTTTACTTGTCCTCTTTGTAGGGACTTTCTGTGTTCTGGGATTAGGTCTGTTAACGGTGAGGAAGGAGAAGCACATGTGCTTTTCTTTAACTTTTCTTCGTTTTCTGATAATAATTATGAGAGTGAGAACTGGTGGCTACGGTGA 495 0.4081 MAITLAIISRFSIHLFSMLFNFLKLTSSHFKWGLEFLLYHSFYSLRVHHHHQPLEEFQMITEDRVEIWHRHREGGEEEEVDCAVCLNKIGEGEEVKVLRCEHVFHRDCLNQWVGFRNFTCPLCRDFLCSGIRSVNGEEGEAHVLFFNFSSFSDNNYESENWWLR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1465 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 128 IPR013083 -
Lele50g1465 164 PANTHER - 19 126 - -
Lele50g1465 164 SUPERFAMILY RING/U-box 75 128 - -
Lele50g1465 164 SMART ring_2 82 123 IPR001841 -
Lele50g1465 164 ProSiteProfiles Zinc finger RING-type profile. 82 124 IPR001841 -
Lele50g1465 164 Pfam Ring finger domain 81 124 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1465 Lele-ChrLele50 19661914 19662408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1465 81 129 C3H Transcription Factor Family AT1G15100 61.224 4.07e-15 67.0