Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1444 ATGGCAACAGTGAAACCTTATTCCTTTCGTAATTTGAACAAAGTTCATCATCATCATCATCTCAATAAGATTACTGTTGGCTTTGTTCTTGTTGTTCTTCTTCTTGTTATTTCTAGTAGATGTGAGGCTTCTGAACTGAGACTTGATTACTATGCTTCGTCTTGCCCTACTGTGTTTGATGTTATTCGCAAGGAAGTGGAGTGTGCTGTGCAGTCCGATCCTCGTAATGCAGCCATGCTTCTTCGTCTTCACTTCCATGACTGCTTTGTCCAGGGATGCGATGGATCAGTGTTGCTGGACGACACAGTAACAGTAAAAGGAGAAAAGAAAGCGTCTACAAACATACACTCTCTCAAAGGCTTCAATCTCATTGATAGAATCAAGAACATGGTTGAATCTGAATGCCCCCAAATTGTCTCTTGTGCTGATCTTCTCACTATTGCTGCTAGAGATGCTGTGGTTCTGGTTGGTGGACCTTATTGGGATGTTCCAATGGGAAGGAAGGATTCAAAAACAGCAAATTTTGCACTTGCCAACACCAACCTTCCAAAACCAGATGACAGCCTTCTCTCCATCATTTCCAAGTTTCTCTATCAAGGCCTCTCAGTTACTGATATGGTTTCTCTTTCAGGAGCTCATACGATTGGCATGGCGCGGTGTGAGAGTTTCCGATTGAGGATTTACAGTGACTTTGAGTTGACTTCGGAGAAAGACGCCATCTCTGAGAATCACCTGAAAGAGCTGAGATCAATGTGTCCACTAACAAAAGAAGGATCATCATCAGAAAATAATGTAACAGCAATGGACTATGTTACCCCAAACCTTTTTGATAATTCTTACTACCACTTGCTTCTGAAAGGCCAGGGATTGCTTAACTCAGATCAAGAACTGTATTCAAGTGTGTTTGGGATTCAAACAAGAGAGCTTGTTAAGAAGTATGCTTTTGATCCTCTCGCTTTTTTCCAGCAATTCTCAGATTCAATGGTGAAGATGGGCAATATTGTCAACCCTGAAAGCTTTGTTGATGGAGAAGTTAGGACGAATTGCAGATTTGTTAACACTTGA 1065 0.4141 MATVKPYSFRNLNKVHHHHHLNKITVGFVLVVLLLVISSRCEASELRLDYYASSCPTVFDVIRKEVECAVQSDPRNAAMLLRLHFHDCFVQGCDGSVLLDDTVTVKGEKKASTNIHSLKGFNLIDRIKNMVESECPQIVSCADLLTIAARDAVVLVGGPYWDVPMGRKDSKTANFALANTNLPKPDDSLLSIISKFLYQGLSVTDMVSLSGAHTIGMARCESFRLRIYSDFELTSEKDAISENHLKELRSMCPLTKEGSSSENNVTAMDYVTPNLFDNSYYHLLLKGQGLLNSDQELYSSVFGIQTRELVKKYAFDPLAFFQQFSDSMVKMGNIVNPESFVDGEVRTNCRFVNT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1444 354 CDD secretory_peroxidase 45 352 IPR033905 GO:0004601|GO:0042744
Lele50g1444 354 FunFam Peroxidase 49 187 - -
Lele50g1444 354 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 326 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 FunFam Peroxidase 183 331 - -
Lele50g1444 354 PANTHER PEROXIDASE 72-RELATED 39 352 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Lele50g1444 354 Pfam Peroxidase 63 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 SUPERFAMILY Heme-dependent peroxidases 46 353 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele50g1444 354 Gene3D Peroxidase, domain 2 183 331 - -
Lele50g1444 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Lele50g1444 354 Gene3D - 49 353 - -
Lele50g1444 354 ProSiteProfiles Plant heme peroxidase family profile. 45 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1444 Lele-ChrLele50 19358565 19361412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1444 46 354 Peroxidase AT1G68850 70.323 4.20e-168 470