Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1438 ATGATCCCTACTGAGATCAGAGGAACAAACCACTATCTAACTCCAGACGACAACCCATTCTTAATCCCACAAAACATCAACACCTTTCTTCCTTCCAACAACCTTTTCACAAACCTTGACATAACCAATCTCCTTGGAACGACCCATCATCAACTTCTTCTTCACAGTGAACTTAATAACGTTGTTCCAGCTTCTTCTTCAACCGCTGATGAAGCTGAAGATCAGAAGCAGACAATCATGATCGATGAGAGGAAACAGAGACGAATGATATCCAACAGAGAGTCAGCTAGAAGGTCGAGGATGAGAAAACAGAGACACAAGGATGAATTGTGGTCTCAGGTTGTTAGACTGAGAACAGAGAACCACAACCTTATTCATAGACTCAACCATGTTTCAGAGTCCCATGATAGGATGGTTCAGGAGAATGCTAAGCTCAAAGAAGAAGCTTCTGATCTTCGCCAAATGGTTGCAGATTTGCAGATTGGCTCTCCTCTTTCTGCCAACGCCCTCACGGATTTTAATGACTTATGA 531 0.4275 MIPTEIRGTNHYLTPDDNPFLIPQNINTFLPSNNLFTNLDITNLLGTTHHQLLLHSELNNVVPASSSTADEAEDQKQTIMIDERKQRRMISNRESARRSRMRKQRHKDELWSQVVRLRTENHNLIHRLNHVSESHDRMVQENAKLKEEASDLRQMVADLQIGSPLSANALTDFNDL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1438 176 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Lele50g1438 176 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Lele50g1438 176 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 11 165 IPR044521 -
Lele50g1438 176 FunFam BZIP transcription factor 82 133 - -
Lele50g1438 176 Pfam bZIP transcription factor 84 138 IPR004827 GO:0003700|GO:0006355
Lele50g1438 176 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Lele50g1438 176 Coils Coil 128 162 - -
Lele50g1438 176 Gene3D - 82 136 - -
Lele50g1438 176 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Lele50g1438 176 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1438 Lele-ChrLele50 19283072 19283602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1438 2 160 bZIP Transcription Factor Family AT1G13600 47.853 4.21e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele50g1438 bZIP_1 1.1e-11 CL0018