Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1425 ATGAGGCCAGGGAAAGGGAATCAGGAGGACGATGAGTACGAGGAAGAAGAGTTCGGTTCTAAAAAGGAAGGTCCTTCGTCCACTCCTAATAGCAATAACGCCGACAAAGATACAAAAGCTATTGATAAGGCTAGTGCTATAAGATCGAAACATTCAGTTACTGAGCAGCGAAGGCGGAGCAAGATTAATGAGAGATACCAGATATTAAGAGATCTCATACCTCATAGTGATCAAAAGAGGGATACTGCGTCATTCCTATTAGAGGTCATTGAGTATGTCCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGTTCATATCAGGGTTGGGGTCAAGAGCCCACTAAGTTGATGCCTTGGAGAAACAGTCACTGGCGCGTTCAAAGCTTTGGCCAACCTCAAGCTGTAAAGAATGGTTCTGGACCTGTATCACCTTTTCCTGGGAAGTTTGATGAAAGCAACATTAGTGTCTCCCCAACTTTGCTCAGTGGCTCCCGGAATATGATCGATCCTGAACAGAGCAGGGATATTGTCAGTAAAACAGTGGAGAGGCAAGCTGAAGTAGAATGCAAGGGGATACCTCTGCCAATGCCTATGCATGCAAGCATGTCTGTACCTGTTAGATGTGATGGTACACTTGTCCATCCTCTTCAGGGGCCTGTTTCTGATGGGCAATCAGCTGAATGTCCATCCAATAGTGAACCTCATAACCAACAGGAGGAGCTGACAATTGAAGGAGGAACAATTAACATCTCAACTGATGGTTCCTTGCTTTTAAAGTGTACAGTAAAACCTCTCGGACCACTAGCTGCTGTTTATGAATTAGCCATACAGCATTTCTTCCCATAGCTGTTACACAATCTGACTCAGGCACTACAGGGTGCTGGTTTAGATCTCTCACAGGCTAGCATTTCAGTTCAAATTAATCTTGGGAAGCGGGCAAACAAAGGACTGGGCTGTGGGACATCTGCTCCTATGCTGTGCCCTCCTCATTTTTCAACCCTAATCCCTCATTTCTCTTTGCGGTTGCCCTCTTCTCCTTCCTCTATTGTCACCCTCCATCCTCTTTTGCCAGCTTCTTCACCTCTCACCCTCTCCCATGATGGCTTCGACCTCAAATCTGCTTGTGGCTTCACTCCACGGGTTTTTTGTCTTGAGAAGAATCATGATAATATCCCATCTAGCAATCAAGGAATGACTCATTTTAGAGATGCAGGCAACGGAGAAGACACTGAGCAAGCTCAGAAGAGGCTAAAAACGTAG 1263 0.4537 MRPGKGNQEDDEYEEEEFGSKKEGPSSTPNSNNADKDTKAIDKASAIRSKHSVTEQRRRSKINERYQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGQEPTKLMPWRNSHWRVQSFGQPQAVKNGSGPVSPFPGKFDESNISVSPTLLSGSRNMIDPEQSRDIVSKTVERQAEVECKGIPLPMPMHASMSVPVRCDGTLVHPLQGPVSDGQSAECPSNSEPHNQQEELTIEGGTINISTDGSLLLKCTVKPLGPLAAVYELAIQHFFPXLLHNLTQALQGAGLDLSQASISVQINLGKRANKGLGCGTSAPMLCPPHFSTLIPHFSLRLPSSPSSIVTLHPLLPASSPLTLSHDGFDLKSACGFTPRVFCLEKNHDNIPSSNQGMTHFRDAGNGEDTEQAQKRLKT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1425 420 FunFam BHLH domain class transcription factor 44 116 - -
Lele50g1425 420 MobiDBLite consensus disorder prediction 394 420 - -
Lele50g1425 420 CDD bHLH_AtBIM_like 45 121 - -
Lele50g1425 420 MobiDBLite consensus disorder prediction 36 59 - -
Lele50g1425 420 MobiDBLite consensus disorder prediction 405 420 - -
Lele50g1425 420 SMART finulus 52 102 IPR011598 GO:0046983
Lele50g1425 420 MobiDBLite consensus disorder prediction 216 237 - -
Lele50g1425 420 MobiDBLite consensus disorder prediction 1 59 - -
Lele50g1425 420 Pfam Helix-loop-helix DNA-binding domain 48 97 IPR011598 GO:0046983
Lele50g1425 420 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 283 420 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele50g1425 420 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 96 IPR011598 GO:0046983
Lele50g1425 420 MobiDBLite consensus disorder prediction 133 168 - -
Lele50g1425 420 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 118 IPR036638 GO:0046983
Lele50g1425 420 MobiDBLite consensus disorder prediction 151 168 - -
Lele50g1425 420 Gene3D - 44 116 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1425 Lele-ChrLele50 19126919 19133080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1425 1 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 53.605 4.66e-106 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele50g1425 HLH 8.2e-13 No_clan