Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1424 ATGCTTATCGTTCTTGATGATGTTGATACATTAGAAGAAAAGTTAAAATCGTTTGCAAGAAACAGAGATGTGTTTGGAAGAGGAAGTAGAATTATCATAATAACAAGGGACAAAAACATCTTTAAAATGCTTCAAGTTGATGAGATTCACAAGGTTGAGCTATTAAACATGGACGAATCTCTTCAACTTTTTTGTGAGACTGCTTTTGGATTTGATTATCCAATGAAAGGTTATGAAGAAGCGACCTTTGAAGCACTTGAATATGCTTGTGGTCTTCCATTGGCAATTAAATCCTTAGGTTCATTGTTAAGGAGCCAAAGAAGTGTATCAGAATGGCATACTGTATTGAATGAACTGAAGGATGTTCTTGAACCTTCAATTTTCACGGGACCTACACATACTCAGGCCATAGTACTGTTGAATCAAGAATATCCAAAAGGCAATGCATTGGAAGTTGAAGCTGGATTCATCTATTGTGCTGCTTCCAAGGCTCAAACATCTGAATTTGAGAAACTGCACGAGTCTTGTTAG 531 0.3653 MLIVLDDVDTLEEKLKSFARNRDVFGRGSRIIIITRDKNIFKMLQVDEIHKVELLNMDESLQLFCETAFGFDYPMKGYEEATFEALEYACGLPLAIKSLGSLLRSQRSVSEWHTVLNELKDVLEPSIFTGPTHTQAIVLLNQEYPKGNALEVEAGFIYCAASKAQTSEFEKLHESC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1424 176 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 126 IPR044974 GO:0006952
Lele50g1424 176 Pfam NB-ARC domain 2 121 IPR002182 GO:0043531
Lele50g1424 176 Gene3D - 54 129 IPR042197 -
Lele50g1424 176 Gene3D - 1 51 IPR027417 -
Lele50g1424 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 128 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1424 Lele-ChrLele50 19123265 19125732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1424 1 129 WRKY Transcription Factor Family AT5G45050 34.884 1.06e-14 69.3