Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1411 ATGATCTCTTGCTTCGTGTTTGATAATATATATAATATAATCAAGATTGATGAAGCTGCGTATGGTTTAGAAATCCCCGACCCCAAAGAAGACAAGAGGAAGAAGTCTAAACATATAGCAGATTTAAAGAAACAGAAGCTAAGTGAAGAAGAGGGTGCCTGTAATGATAAGGCTGGGGTAACTTTTGAAGAAAACAAGGATGAGAGTGTGATGAGTGATGACTATAAAGAAGGAAAAGAAGAAGAAGAAGGAAGCTTCTGTTGTTTAGTTTCAGATTGTCAGTTGAGACTTCATCCTCTGCTCATTAAACCAATTTGCAAGCTTGGGTTCAAGGAGCCCACGCCAATGCAGAAAGCTTGTATTCCAGCTGCTGCTCATCAAGGGAAGGATGTTGTTGGGGCTTCTGAGACTAGATCTGGGAAAACTCTTGCTTTTGGTTTACCCATTCTGCAACGCCTTTTAGAGGAGAGGGAGAAGGCTGCAGAGATGGTTGAACAGAGGGGCGAAGAACCTGACAAATATGCTCCTACTGGCCTTCTAAGGGCTCTAATAATTGCTTTAACTAGGGAACTTGCACTTCAGAATGGAATGATTGCCACAGCAGCTAAAACTGGGCTGAAAGCGAGTGTTTGGGAGCTGCAAGAGAGAATAATATTATATTTTTCTCAGCAAACAGGAGGCCCTTTTTCTGTTTTGGAAACAGGAATTGATTATGAAAGCCAGCGAAATGAGACTACTTTGAAGGTATATCTTGGTTGGTTGAGCATTGTTGTCAAATGA 780 0.4128 MISCFVFDNIYNIIKIDEAAYGLEIPDPKEDKRKKSKHIADLKKQKLSEEEGACNDKAGVTFEENKDESVMSDDYKEGKEEEEGSFCCLVSDCQLRLHPLLIKPICKLGFKEPTPMQKACIPAAAHQGKDVVGASETRSGKTLAFGLPILQRLLEEREKAAEMVEQRGEEPDKYAPTGLLRALIIALTRELALQNGMIATAAKTGLKASVWELQERIILYFSQQTGGPFSVLETGIDYESQRNETTLKVYLGWLSIVVK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1411 259 Gene3D - 28 245 IPR027417 -
Lele50g1411 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 200 IPR027417 -
Lele50g1411 259 Coils Coil 150 170 - -
Lele50g1411 259 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 90 118 IPR014014 GO:0003724
Lele50g1411 259 PANTHER RNA HELICASE 45 195 - -
Lele50g1411 259 Pfam DEAD/DEAH box helicase 114 202 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1411 Lele-ChrLele50 18778436 18783310 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1411 97 194 Eukaryotic Initiation Factors Gene Family AT5G11200 33.673 4.11e-06 45.4