Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1390 ATGGATCAGGGCACTTTCTCTGCCCGAACCCGGAAAGCCAGACCCAAGTCTGACCTGTATTCCACCGTTGTCTTGCACGACGACGACGACGACGACAGCGGCGATAAGCGAGAGCAAAGCCGGAGCGGACGGAATGCCAGAGGCTCGGGGCCCGAGGACGATCCATATGCGACGATGGTCTACAAAGACAATGGTCATGATGACGAAGAGGATGACGACTCCTCCCTCCCTCCTCTTCTCAAGCGCCTGCCGAAGGACTTCGGTGGTGGACCCTCGATGGACTACGAAGACGATACTGACGACGATGCCGGCGATTTTGGCACCATGATCGTTAAGACCGATCGAGCTCGGGACCGAAATCGGTCTTCTTCGTCGCACATGGGTTCGACCTGGAAGTCTTGGAAGTCTCCTTTGAGGCAGGCAAGTCCAATGACGGGACTGGGTGATGGGGATGATGAAGATGATGACGGAGGCGAGGGGTTTTCAACTTTTGTCGTACGTAAAACGGCTAGGTCCAGTGAGAGAGAGTCGGTCAGTGGAACCGTGGTGCGTAGGACAAGTGGCGGTGCCAGTGGTGGCGGAACTGGTACTGGCTCGACAATGGAAAGAGCGGTGGCGAGTATGCAGGCATCGGGTGAGCTGGGATTTGGGAAACAGGGGAGGGGAAGCGGGCCCTTGCAGAACGACGATGGTAGGCAATCAATAGGGACGAAGGTTTCATCGAGTTCGATACCGGAAAGCGTCACTAGAGAGGATCCTACAACTAAGTACGAATTGCTCAATGAACTTGGGAAGGGATCTTACGGGTCTGTTTACAAAGCTCGGGATTTAAAGACTTCCGAGCTTGTTGCTATCAAAGTCATTTCCCTTTCTGAAGGGGAGGAGGGATACGAGGAAATCCGGGGTGAAATTGAGATGTTGCAGCAATGTAATCATCCAAACGTGGTCCGCTACCTTGGAAGCTATCAGGGAGAAGAGTATCTTTGGATAGTTATGGAATACTGTGGCGGTGGTAGTGTTGCGGACCTGATGAATGTGACTGAGGATCCACTGGATGAGGGTCAGATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAGTATTTGCACTCCATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACCAGGACCATGTCCAAGCGAAACACGTTCATTGGAACACCCCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGACGTGTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCAGAGGGCCTTCCTCCAAGATCTGCTGTCCATCCAATGAGGGTTTTGTTCATGATATCCATTGAACCAGCACCAATGCTTGAGGATAAAGAAAAATGGTCGCTACATTTTCACGACTTTGTTGCTAAGTGCCTTACTAAGGAACCTCGTTTACGCCCTACCGCATCAGAGATGTTAAAGCACAAATTCTTTGACAAATGGAAAACTGGATCAACAGCAATGATGCCAAAAATTGAAAAGGCTAGGCAAATCAGAAAATCGATGGCCTTGCAAGTACAAACTGTTGCTCCAGCTGCATTAGAAGATCAGTCAAATGAGCAAAAACTGAATGATGACTATGGAGATACTGTTCCATCAAGACCTCTTAACATTGGGGTTCAAGGGGCAGGTGGTCTTTCTTCTGATGGAACTCTGAGGAGGCTAAATAGGTTGGAAAGTGTGGGACTGAGTGAAGGTAACTTTGGCACTGTAGTAGTCCATGGAGATGTGGTTGATACAGCAGCAGTTAGATCACAGGGTGCAGATAATGCAGATTCCTCTGCTTCCTTCATTAGTGGAACAAGAGGCAGATTGGCTGATTCTCGGGTGGAGAGTCTGGAAGTTGCTGTGTCAAGTGATGCCTCTGTTACCATAAAATCATGTTTATCTCCTATTAATGACTCGGCTGAGATGGAACACAAAATAAGGGGTGATTTTCAAGCAACAGTTGGAGCCAGCAGTGATAGAAGGAATGGAACATTGAAGAATGAAACAGTCAGCAGAAAAGCATTTGCTTTACAGGATAAGCTTTGGTCAATTTATGCAGCTGGTAATACAGTACCCATTCCATTCTTAAGGGCAACAGATATTTCACCTATTGCTCTCCTTTCGGATAATGTGCTTGGTGGCATGCAACAAGACTCCACTGGAACTACTACAGTAGAAGCATTGCACGAGCTTTTTAGTGGTGATGGACAGTCCAAAAGGGGACGCAGAGGACAAATTGAGATGCCTGTTCCACCAAGCATTTACCAGAGACTGACATCGAGTTCTACTCTACTGAATTTGGCCCAGGCTCTAGCTTACCACAAGATGTGTTATGAAGATATGCCGTTGCAGGACCTGCAGGCAACCCAAGAGCAGCAGACCATCCAAAACCTCTGTGATACTCTTCGTACTATTCTTCGCTTGTAG 2514 0.4805 MDQGTFSARTRKARPKSDLYSTVVLHDDDDDDSGDKREQSRSGRNARGSGPEDDPYATMVYKDNGHDDEEDDDSSLPPLLKRLPKDFGGGPSMDYEDDTDDDAGDFGTMIVKTDRARDRNRSSSSHMGSTWKSWKSPLRQASPMTGLGDGDDEDDDGGEGFSTFVVRKTARSSERESVSGTVVRRTSGGASGGGTGTGSTMERAVASMQASGELGFGKQGRGSGPLQNDDGRQSIGTKVSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEDPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLHFHDFVAKCLTKEPRLRPTASEMLKHKFFDKWKTGSTAMMPKIEKARQIRKSMALQVQTVAPAALEDQSNEQKLNDDYGDTVPSRPLNIGVQGAGGLSSDGTLRRLNRLESVGLSEGNFGTVVVHGDVVDTAAVRSQGADNADSSASFISGTRGRLADSRVESLEVAVSSDASVTIKSCLSPINDSAEMEHKIRGDFQATVGASSDRRNGTLKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDSTGTTTVEALHELFSGDGQSKRGRRGQIEMPVPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQDLQATQEQQTIQNLCDTLRTILRL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1390 837 FunFam Aurora kinase A 249 338 - -
Lele50g1390 837 SMART serkin_6 257 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1390 837 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 240 548 - -
Lele50g1390 837 CDD STKc_MAP4K3_like 256 511 - -
Lele50g1390 837 ProSiteProfiles Protein kinase domain profile. 257 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1390 837 MobiDBLite consensus disorder prediction 123 140 - -
Lele50g1390 837 MobiDBLite consensus disorder prediction 226 250 - -
Lele50g1390 837 MobiDBLite consensus disorder prediction 214 253 - -
Lele50g1390 837 ProSitePatterns Protein kinases ATP-binding region signature. 263 286 IPR017441 GO:0005524
Lele50g1390 837 Gene3D Transferase(Phosphotransferase) domain 1 253 550 - -
Lele50g1390 837 MobiDBLite consensus disorder prediction 7 43 - -
Lele50g1390 837 FunFam serine/threonine-protein kinase dst1 isoform X1 254 545 - -
Lele50g1390 837 MobiDBLite consensus disorder prediction 175 200 - -
Lele50g1390 837 MobiDBLite consensus disorder prediction 1 200 - -
Lele50g1390 837 Pfam Protein kinase domain 257 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1390 837 MobiDBLite consensus disorder prediction 105 122 - -
Lele50g1390 837 SUPERFAMILY Protein kinase-like (PK-like) 254 512 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1390 Lele-ChrLele50 18506592 18516167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1390 7 837 MAP Kinase Kinase Kinase Kinase AT1G69220 59.953 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Lele50g1390 Pkinase 1.3e-69 CL0016