Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1382 ATGACCTCTGACGGCGAGGACGACAAAGGAAGCCTCGGGAGTGTTTGCTTAGGTCTGGTTGATGCCGTTTTCCCCTTTGCTCCCAAAAGAGGTGTAAAGGCTCCAGTTGCAGCTGCTAAGAAGAAGCAGGACTGTACTGATTACCTTTTATTAATCTCATTTGTAGCAACCAGCCTGTTCAAGATGCTCCTTAAGTACAGGCCTGAGGATAAAGCAGAAAAGACAGGACGGCTCTTGAAGAGAGCTCAGGCAGAAGCAGAAGGAATATCTGCTGAAGCTAAGAAGCCTATTGTTGTGAAATATGGTCTTAATCACGTCGCTTACCTTATTGAGCAGAATAAAGCACAGCTGGTTGTGATTGCGCATGATGTAGATCCAATTGAATTGGTTGTCTGGCTGCCAGCATTGTGCAGGAAGATGGAAATTCCCTACTGCATTGGCAAGGGCAAGGCACGCTTGGGATCGATTGTCCATAAGAAAACTGCATCAGTTCTTTGCTTAACTACTGTCAAGAATGAAGACAAGTTAGAATTCTCTAAGATTCTAGAGGCTATCAAGGCCAACTTCAATGACAAGTATGATGAGTACAGGAAGAAGTGGGGTGGTGGCATTATGGGTTCTAAATCCCAAGCTAGAACTAAGGCCAAGGAAAGGCTCCTTGCCAAGGAAGCAGCTCAGAGAATGTCTTAA 690 0.4522 MTSDGEDDKGSLGSVCLGLVDAVFPFAPKRGVKAPVAAAKKKQDCTDYLLLISFVATSLFKMLLKYRPEDKAEKTGRLLKRAQAEAEGISAEAKKPIVVKYGLNHVAYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIGKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1382 229 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 91 176 IPR004038 -
Lele50g1382 229 SUPERFAMILY L30e-like 59 200 IPR029064 -
Lele50g1382 229 PRINTS Ribosomal protein L7A family signature 156 180 IPR001921 -
Lele50g1382 229 PRINTS Ribosomal protein L7A family signature 188 208 IPR001921 -
Lele50g1382 229 PRINTS Ribosomal protein L7A family signature 95 115 IPR001921 -
Lele50g1382 229 PRINTS Ribosomal protein L7A family signature 61 74 IPR001921 -
Lele50g1382 229 Gene3D - 51 223 IPR029064 -
Lele50g1382 229 PRINTS Ribosomal protein L7A/RS6 family signature 144 158 IPR018492 -
Lele50g1382 229 PRINTS Ribosomal protein L7A/RS6 family signature 99 113 IPR018492 -
Lele50g1382 229 PRINTS Ribosomal protein L7A/RS6 family signature 134 144 IPR018492 -
Lele50g1382 229 PRINTS Ribosomal protein L7A/RS6 family signature 118 131 IPR018492 -
Lele50g1382 229 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 61 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1382 Lele-ChrLele50 18363730 18366718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1382 55 229 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 86.286 7.46e-111 317