Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1381 ATGGAGCCCGGTTCAACAACAGGCTCTGATCTTCCCCCAGGCTTCAGATTTCACCCCACCGATGAAGAGCTAATCGTCCATTACCTCTGTAACCAAGCCACCTCCAAGCCTTGCCCTGCTTCTATCATCCCTGAAGTTGATATCTACAAGTTTGATCCCTGGCAATTACCAGAGAAGGCAGTGTTTGGAGAGAATGAGTGGTATTTCTTTACCCCAAGAGACAGGAAGTACCCAAATGGTGTGAGGCCAAACAGGGCCACTGTTTCTGGCTACTGGAAGGCCACTGGCACAGATAAGGCAATTTATAGTGGCTCCAAACACATTGGGGTGAAAAAAGCTCTGGTCTTTTACAAAGGCAGGCCACCAAAAGGTATCAAAACCGATTGGATCATGCATGAGTATCGTCTCATTGGTTCTCCTAGACGAGCCAACAAGCATATTGGATCCATGAGATTGGATGATTGGGTGCTGTGTAGGATTTACAAGAAGAAGAACATGGCAAAATCAATGGAACTAAAGGAGGAAATAATGGAGGAAGAAGAATACCCAAGTACTGAAATGATGAACAATATAAGAGAAGAAAACAATAAGATCAATAATATTGGCTCCGAGCAGCAACAACAATTGGTGAAATTTCCAAGGACTTGTTCTCTGACTCATCTTCTGGAAATGGATTCTTACTTGGCTCCAATCTCACACCTTTTATCTGATGCTTCCTATAACTCAACATTTGATTATCAGATCAATAATTCTGGGAATTATATAACAGACCCATTTGTAAAATCTCAGCTCTTTGAGGTCCCTTCAGATCAGTGCTATGCAACATCATCATCAACCAGTCTGCAGTATTTGTGA 855 0.4257 MEPGSTTGSDLPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKAVFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGRPPKGIKTDWIMHEYRLIGSPRRANKHIGSMRLDDWVLCRIYKKKNMAKSMELKEEIMEEEEYPSTEMMNNIREENNKINNIGSEQQQQLVKFPRTCSLTHLLEMDSYLAPISHLLSDASYNSTFDYQINNSGNYITDPFVKSQLFEVPSDQCYATSSSTSLQYL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1381 284 PANTHER NAC TRANSCRIPTION FACTOR 56 11 200 - -
Lele50g1381 284 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Lele50g1381 284 FunFam NAC transcription factor 20 167 - -
Lele50g1381 284 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Lele50g1381 284 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
Lele50g1381 284 SUPERFAMILY NAC domain 8 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1381 Lele-ChrLele50 18277303 18278471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1381 6 234 NAC Transcription Factor Family AT1G69490 67.100 3.49e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele50g1381 NAM 5e-39 No_clan