Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1368 ATGAGGGGAACAAAAGGGTATGTCGTACTTGAATGGTTCAATAACATGCCTATTACAGCAAAAGTAGATGTTTATATCTTTGGTGTATTGCTACTTGAGATTGTCTGTTGCGGAAGAAGTGTGGAAATGGATTCAGAAAATGCTGCAGAGAAGGCAATCTTAGCAGATTGGGCTTATGATTGCTTCACAGAAGGTTCTTTAGATGCTTTGGTTAAGCAAGATGAACAGGCATCGAATGACAAAAATAATCTTGAAAAATTAGTGATGATTGCCATTTGGTGTTTCAAGGGGAGCCAACTCTTAGACGCTTCATGA 315 0.3873 MRGTKGYVVLEWFNNMPITAKVDVYIFGVLLLEIVCCGRSVEMDSENAAEKAILADWAYDCFTEGSLDALVKQDEQASNDKNNLEKLVMIAIWCFKGSQLLDAS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1368 104 Coils Coil 67 87 - -
Lele50g1368 104 SUPERFAMILY Protein kinase-like (PK-like) 2 57 IPR011009 -
Lele50g1368 104 Gene3D Transferase(Phosphotransferase) domain 1 1 100 - -
Lele50g1368 104 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1368 Lele-ChrLele50 16905871 16906185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1368 1 96 Receptor kinase-like Gene Family AT5G39000 36.458 1.80e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele50g1368 None None None