Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1330 ATGTTTTCGGACAAGGAAAGAGAGACCCACGTTTACATGGCAAAGCTCTCTGAGCAGGCCGAGCGATACGATGAAATGGTTGAGCATGTGAAGACAGTGGCAAAACTGAATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCTGTGGGATATAAAAACGTCATTGGTGCAAGGCGAGCATCTTGGCGTATTATGTCTTCAATTGAGCAGAAAGAAGAGTCTAAGGGAAATGAGAACAATGTTAAGCTGATCAAGAGTTACCGCCAAAAGGTTGAGGAGGAACTCTCTAAGATTTGTGGTGACATTCTGACAATTATTGATGAGCATCTTATACCCTCTTCCACATCTGGAGAAGCCACTGTTTTTTACTATAAGATGAAAGGTGACTATTTTAGGTATCTTGCAGAGTTCAAGACTGACCAAGCAAGGAAAGAGGCAGCTGAGCAGTCCCTCAAGGGATATGAAGCTGCTTCAGCCACTGCTAACACAGAACTTCCATCAACACACCCGATCCGTCTTGGTCTTGCGCTTAATTTCTCTGTGTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCATGTCATTTGGCTAAACAAGCCTTCGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTGTGGACCTCCGATTTGCCAGAGGATGGAGGTGAAGATGGTAACAAAAATGAAGAAGCCAAACCGGCTGAACCTGAGGTTTGTTTTGATAATGATTTCTTTGCCACATACACATGA 813 0.4367 MFSDKERETHVYMAKLSEQAERYDEMVEHVKTVAKLNLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYRQKVEEELSKICGDILTIIDEHLIPSSTSGEATVFYYKMKGDYFRYLAEFKTDQARKEAAEQSLKGYEAASATANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDGNKNEEAKPAEPEVCFDNDFFATYT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1330 270 Coils Coil 195 215 - -
Lele50g1330 270 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Lele50g1330 270 Coils Coil 145 165 - -
Lele50g1330 270 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lele50g1330 270 FunFam 14-3-3 protein epsilon 1 249 - -
Lele50g1330 270 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Lele50g1330 270 SMART 1433_4 7 248 IPR023410 -
Lele50g1330 270 Pfam 14-3-3 protein 13 235 IPR023410 -
Lele50g1330 270 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Lele50g1330 270 Gene3D - 1 246 IPR036815 -
Lele50g1330 270 PIRSF 14-3-3 1 251 IPR000308 -
Lele50g1330 270 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lele50g1330 270 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lele50g1330 270 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lele50g1330 270 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lele50g1330 270 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lele50g1330 270 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1330 Lele-ChrLele50 15940848 15943424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1330 3 256 14-3-3 family AT1G26480 86.873 5.22e-167 461