Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1319 ATGACTCGCTTATCGGGGAGAATTCTCCATCCTCCCAAGCTTAAGCTTGGAAATGGAGGTCAAGTGACGAAGCTAGTTCCTTCACGGCATGACCGCCAGTGGAACCTTCTGGATGGTTATGTCCTCGAGGGAACTAAAATCGAACGGTGGGCGTTAATAGGCTTTGGTGGTACACCTGAACAGAAGTCCAATGTCCCTAGATTTATAAGCCGGCTATCTCAACGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATGGTTAGCCCCCATTTTGAATCAACCCAGGTGCTTAACAATGTCTCCCTTCTCGAATCTAAGCTCGAGAAAATCCAGAGAAGCACCTCGAACAATCTGCAGCTGCTTATTTGTGTTATGGAGAGAAAACACATAGGGTATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGGGTTGTGAGCCAATTCAGCTTGTATCCAAATCTCAAAATCAATGCCAAAGTTGGTGGATGCACGGTTGCCCTGTACAATTCACTTCCATCTCAAATTCCGCGACTCTTTAAGTATGATGAACCGGCTATATTTATGGGTGCTGATGTAACTCTTCTTCATCCACTTGATGATCATAGTCCATCTGTCGCCGCTGTTGTTGGTAGCATGAACTGGCCTTCTGCGAACAAATACATTTCGCGAATAAGGTCGCAAACGCCCTGCAAGAAATCATCCAGGATCTCAGTGCAATGGAGGCATCATCACACAAGGTTGTTCCCCTTTGAAACTGATCATTGTTATGAGAATATTCCACCGGGGACCGTTGTTGACTCCGTGATCACTCATCCGATGGAGTTCGATTTCTATCTTTGTAGTCATTGGGGCATGAAAGGAACAAGCAGGCTCTACATTGACAGGTCAGATTCCTCTGCTTTATCTAAAGGTATCTCTTCATTATCTAGAGCTGCAGCTCCAAAACACCTCTTCCAAAAGTTAGTGAGAACATCAATAAGCTCATGTTCTACTGCTAATGATATTATATGTTCCTGCCATGCAATTTGA 1038 0.4403 MTRLSGRILHPPKLKLGNGGQVTKLVPSRHDRQWNLLDGYVLEGTKIERWALIGFGGTPEQKSNVPRFISRLSQRCEEMGIFLNKNTMVSPHFESTQVLNNVSLLESKLEKIQRSTSNNLQLLICVMERKHIGYADLKRIAETSIGVVSQFSLYPNLKINAKVGGCTVALYNSLPSQIPRLFKYDEPAIFMGADVTLLHPLDDHSPSVAAVVGSMNWPSANKYISRIRSQTPCKKSSRISVQWRHHHTRLFPFETDHCYENIPPGTVVDSVITHPMEFDFYLCSHWGMKGTSRLYIDRSDSSALSKGISSLSRAAAPKHLFQKLVRTSISSCSTANDIICSCHAI 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1319 345 Gene3D - 8 171 - -
Lele50g1319 345 SUPERFAMILY Ribonuclease H-like 5 293 IPR012337 -
Lele50g1319 345 Gene3D - 237 296 IPR036397 GO:0003676
Lele50g1319 345 Gene3D - 183 236 IPR036397 GO:0003676
Lele50g1319 345 Pfam Piwi domain 157 235 IPR003165 GO:0003676
Lele50g1319 345 Pfam Piwi domain 241 293 IPR003165 GO:0003676
Lele50g1319 345 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 239 293 - -
Lele50g1319 345 SMART Piwi_a_2 122 330 IPR003165 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele50g1319 Lele-ChrLele50 15691926 15693149 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1319 241 293 Eukaryotic Initiation Factors Gene Family AT1G48410 56.897 5.28e-12 65.1