Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1318 ATGGGAAGAACCAAAGATCTTGGAGGAGGAGCTGCTGGTTTGAGAGGGTTCTTTCAGAGTCTTAGACCAATTCAACAAGGACTTGCCCTCAATGTTGACTTTTCTATAACTGCTTGTCATGAAAGCATAGAAATCATTCAATACTTGCCGAAGCTTGTCGAGTTCCTTCAAGATCTTTCTCAAAGGAAGACAGCAAGTTTAACAGGTGAAGAGAGGAAAGAAGTGGAGAGGGCTTTGAAGAACATCAGGGTCTTTGTTTGTCATAGAGAAACTGTTCAGAGATATCGTGTCTATGGCTTAACTGAGGAAGCTACTGAAAATCTTTGGTTCAGTGATAGGGATGGAAAGAATCTTAGGCTCTTAAAGATCACTATAACTATGATATACAATTTAGTAAACTTCCATGCTTGCAAATTAGTAGGAGCAAACCATGTTATCTTCCTATGGAGCCTTGTATCATCTGTAAAGGCCAGAAGTTCCTTGGAAAGTTTTCCGATGATCAGACTGCAAAAATACTCAAAATGGGTTACCAAAGACCAAGAGAACGAAAAGCCATCAATGAAGGAGTCATGA 573 0.3979 MGRTKDLGGGAAGLRGFFQSLRPIQQGLALNVDFSITACHESIEIIQYLPKLVEFLQDLSQRKTASLTGEERKEVERALKNIRVFVCHRETVQRYRVYGLTEEATENLWFSDRDGKNLRLLKITITMIYNLVNFHACKLVGANHVIFLWSLVSSVKARSSLESFPMIRLQKYSKWVTKDQENEKPSMKES 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1318 190 CDD PAZ_argonaute_like 51 117 - -
Lele50g1318 190 Gene3D paz domain 42 130 - -
Lele50g1318 190 SUPERFAMILY PAZ domain 37 116 IPR036085 GO:0005515
Lele50g1318 190 ProSiteProfiles PAZ domain profile. 50 129 IPR003100 GO:0005515
Lele50g1318 190 SMART DUF1785_2 1 42 IPR014811 -
Lele50g1318 190 Pfam Argonaute linker 1 domain 4 40 IPR014811 -
Lele50g1318 190 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 8 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1318 Lele-ChrLele50 15691161 15691733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1318 1 111 Eukaryotic Initiation Factors Gene Family AT1G48410 40.179 1.62e-18 80.9