Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1309 ATGGAGATGGAAAGCCACTGTGAAGATCCTCATTCATCAGAGCAGTTCAGCAGAAGAGGAACTACCTTTTTCGAAACTTGTTTCAATGGACTCAATACCTTAACAGGTATTGGAATACTTTCAATGCCCTATGCAGTTTCTCAAGGAGGGTGGTTAAGTTTAATTATGCTACTTCTGGTCGCAATGCTTTGTTGGTACACAGGACTGCTTCTACACAGGTGTATGAATGGACGGCCCCTCATCAAATCCTACCCCGACATAGCCGCGGAAGCTTTTGGAGACAAAGGAAGAGCCCTAGTATCCACAGTGATCTACCTAGAACTGTTTCTGGCAGCCATAGCACTTCTAATATTAGAAGGTGACAACTTGGAGAAGATGTTCCCAAACATGAGCTTCAAAGCATGTGGCCTCAAAATTGCAGGGAAACAAGGCTTTGTGGTTCTCACAGCCCTAGTGATATTACCAACCACATGGCTAAGAAACTTAGGTATTTTGGCCTATGTTTCTGTTGGTGGTGCCCTAACATCAATTATTCTGGTTGGTTGTGTTAGTTGGGTTGGAGCTTTTGATGGTGTAATGTTTCATGAAAGAGGAAAAATAGTGAATTTGGGAGGATTGACTACGTCTGTTAGCCTCTATATATTTTGCTATTGTGGCCACTCTGTGTTTCCGACCTTACGCAGTTCCATGAAAGATACAAGACAATTTCCCAAGGTTCTACTTATCTGCTTTACCATAAGCACCGTAACATATGGAGTCATGGCCATAATAGGCTACATGATATTTGGAGAATTTTCAAAGTCTCAAGTGACCTTAAATCTTCCAACAAGAGAATTAAGCACCAAAATAGCAATATATGCTACAATAATTAACCCGATCGCTAAGTATGCAATTATGGTCACTCCAATCGCCAATGCTATGGAGAGCAAAATGCTATTTCATAATAAAAAGAGCAGGCCTATTAGCGTAATCATTAGAACAAGCATTTTGATAAGCACCGTTCTTGTTGCACTGTTTATTCCATTTTTTGGATACCTCATGGCTTTCACTGGTGCTCTCTTGGGTGTCACTGTCTCATTGATTCTACCTTCCCTGTGTTACCTAAAGATCAATAAAGCTGCTCGAAGATTCGGGTTCGAGTTGATGATCATTACTGGGATTCTACTAATAGGACCATTCATTGTTGTGCTCGGTAGCTACTACTCTGTGAAACAAATAGTTAATCATTTACAGAAGCCATAA 1242 0.4074 MEMESHCEDPHSSEQFSRRGTTFFETCFNGLNTLTGIGILSMPYAVSQGGWLSLIMLLLVAMLCWYTGLLLHRCMNGRPLIKSYPDIAAEAFGDKGRALVSTVIYLELFLAAIALLILEGDNLEKMFPNMSFKACGLKIAGKQGFVVLTALVILPTTWLRNLGILAYVSVGGALTSIILVGCVSWVGAFDGVMFHERGKIVNLGGLTTSVSLYIFCYCGHSVFPTLRSSMKDTRQFPKVLLICFTISTVTYGVMAIIGYMIFGEFSKSQVTLNLPTRELSTKIAIYATIINPIAKYAIMVTPIANAMESKMLFHNKKSRPISVIIRTSILISTVLVALFIPFFGYLMAFTGALLGVTVSLILPSLCYLKINKAARRFGFELMIITGILLIGPFIVVLGSYYSVKQIVNHLQKP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1309 413 PANTHER OS05G0424000 PROTEIN-RELATED 32 383 - -
Lele50g1309 413 Pfam Transmembrane amino acid transporter protein 20 375 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1309 Lele-ChrLele50 14441146 14444884 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1309 8 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.000 4.35e-135 391