Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1307 ATGGATCTGCAAAATATGCAAAACCGAAGCATGCATTTGGTTCTTTCCTCTGATGCCAAGCCAAGGCTTAAATGGACTCCTGAGCTTCATCAACGATTCCTTGATGCTATTAATCAGCTTGGAGGGCCTGAAAAGGCAACCCCAAAAAGTCTTATGAGGGTGATGGGGATTCCAGGACTTTCCTTGTACCACCTGAAGAGCCATTTACAGGCATTTCCTCTTTTTAAATTCAGACTTGGGAAAAGCCCTCAACCAGAAGCCTTGTATGATGATAAACAAGAAGATTATAGAGAAGCCCAACGCAGTAATGGTCATTGCAGCAGGGAAACCACTGTGAGAACACAGAATCAGACCACTGAAAGCCAGCAGATTGCTCAAGCTCTCCAACTACAAATGGAAGTGCAGAGGAAGCTTTATGAACAAATTGGGGTGCAGAGACATTTGCAGCTTCGGATCGAAGCTCAAGGGAAATACTTACAATCTGTGCTATTAAAAGCTCAGGAAGCACTTGCAGGGTACAATCCTTCTGCTGCTGGTATAGAACATGCAAAAGCTGAGCTCTCTCAATTAGTCTCAATAATCAACAATGGCTGCCCAAGTTCGCCCATCTCAGAACTGACAGAAACTGGAGTTTTGAGCTTGAAAGATGGAGGAGAGAGGAAGCAAAGCAGAGGGACTATGTGGTCATTGGAGAGTTCCTTGACATATTATGAAAGCTCAGGAACAAAGGAGGAAGAGGAGTCTCATAACTCTATCAGAACTTCAGTTGAACTGCAATTGATGACTGTTCACCCAGAAGAAGATAACAAAGAATTGAATGGTGACTCACAGAATCAAGCTTGTGGGAGAAAAGGGAGTGGAACCACTGATTCGGATAGTTACTGTGTAGAGCAACCAATCAGTAAAAGATGCAGCAACCGGTCCAGGAAACCTGCGTCGTCTGAATTGCTTGATTTGAATAGCCAGTATCACAGTGATACTGACTCAGACTCAGAGCATAGACCTGAATTGCGATTCAACGCACATTTTTAG 1032 0.438 MDLQNMQNRSMHLVLSSDAKPRLKWTPELHQRFLDAINQLGGPEKATPKSLMRVMGIPGLSLYHLKSHLQAFPLFKFRLGKSPQPEALYDDKQEDYREAQRSNGHCSRETTVRTQNQTTESQQIAQALQLQMEVQRKLYEQIGVQRHLQLRIEAQGKYLQSVLLKAQEALAGYNPSAAGIEHAKAELSQLVSIINNGCPSSPISELTETGVLSLKDGGERKQSRGTMWSLESSLTYYESSGTKEEEESHNSIRTSVELQLMTVHPEEDNKELNGDSQNQACGRKGSGTTDSDSYCVEQPISKRCSNRSRKPASSELLDLNSQYHSDTDSDSEHRPELRFNAHF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1307 343 Pfam MYB-CC type transfactor, LHEQLE motif 123 168 IPR025756 -
Lele50g1307 343 Gene3D - 19 81 - -
Lele50g1307 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 288 IPR044848 GO:0003700
Lele50g1307 343 MobiDBLite consensus disorder prediction 325 343 - -
Lele50g1307 343 MobiDBLite consensus disorder prediction 94 118 - -
Lele50g1307 343 MobiDBLite consensus disorder prediction 267 343 - -
Lele50g1307 343 Pfam Myb-like DNA-binding domain 22 70 IPR001005 -
Lele50g1307 343 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Lele50g1307 343 MobiDBLite consensus disorder prediction 274 324 - -
Lele50g1307 343 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 73 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1307 Lele-ChrLele50 13674370 13675825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1307 11 303 G2-like Transcription Factor Family AT1G69580 45.484 5.19e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele50g1307 Myb_DNA-binding 1.7e-05 CL0123