Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1300 ATGCCTTCAAATAAAGTGATTAATTTCACTCTCAACTACGCACTTAGCTTCTTTTGTTTACTTCTTCTTCTTCTAGGTTTTATTTTCTTCTCAAAGCCTAAGCCATTTCTCAGGAAGAAGCTAGCTAGCTTCCCACCTTGTTTCTGGTGCATTGGGTTGAAGAAATCTCTTGTCTTCTACAAAGGAAGAGCTGGAAAAGGAGTTAAGACTGACTGGATGATGCATGAGTTCAGATTACCTTCTCTCTCTGACTCTTCTTCCTCTTCACCAATGAAGTTCACAGAGAGAACCATCCCAGCTAATGCAATTTGCAGAATATTCAACAAAACAAACTCTACAGCCCAAAGATCTCTCTCTAACTCCTGGGTCTCTCCCTTACCTCATGAAATGAATGCTTCTGAGATGCTAAAAAACGACGCTTCCAAGTTTTGTTCAGATCATCATAACAACATTTCGTCATTGACAAAGAAAACTAGCTTGCCCAACCAGTTCTGTACCAACCAAAACGACCCCTTAACCTCCACCACTACCAGTAGTGTTTATTGCCCTTTTGATATTTCCTCTTACAAACCCATCATTAACCCATTATTGTTTTACAAACCTTTTGAACAATTACCCATCATTTCATCATCAAATAACTCAGACTTCATGTTTTCATCATCATCACCTCTTGAGCCATGCAGTGCTAAAACCACTACAACCATGGACATTTCCTCCATGTTACTGAGCATGTCATCATCATCATCTTCTGTTCTTGAATACTTTAGCAGCAAGGCTGCTTCATCAGAGGGTGGTGTAAATTTTGGAGGGTTTCAAGAACAATACAGCACTAGGAATAATAATACTGGATATTCACCAGTAATCAAAGATGGGAATGGATTGGTGAAGATGATGATGAATCACCCTAATACTAAGCTGATGAATGTGAATGTAGTAATCCCTAGAGTAATGGAGGAGCCAGATCAGATGAATATGCATGAAGCATGGAAGTCAAATCTGCTTTGGGATAGTTCATCTTGTCCCTGTGACCACGTGCCCTCTACTACTAATTATTCTATTACTACCAAGTGCTATACTCAGGAGAGAGTCAAGTTTATTTGTTGTTATTATTATTGTTAG 1119 0.3896 MPSNKVINFTLNYALSFFCLLLLLLGFIFFSKPKPFLRKKLASFPPCFWCIGLKKSLVFYKGRAGKGVKTDWMMHEFRLPSLSDSSSSSPMKFTERTIPANAICRIFNKTNSTAQRSLSNSWVSPLPHEMNASEMLKNDASKFCSDHHNNISSLTKKTSLPNQFCTNQNDPLTSTTTSSVYCPFDISSYKPIINPLLFYKPFEQLPIISSSNNSDFMFSSSSPLEPCSAKTTTTMDISSMLLSMSSSSSSVLEYFSSKAASSEGGVNFGGFQEQYSTRNNNTGYSPVIKDGNGLVKMMMNHPNTKLMNVNVVIPRVMEEPDQMNMHEAWKSNLLWDSSSCPCDHVPSTTNYSITTKCYTQERVKFICCYYYC 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1300 372 Pfam No apical meristem (NAM) protein 51 79 IPR003441 GO:0003677|GO:0006355
Lele50g1300 372 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 50 178 - -
Lele50g1300 372 SUPERFAMILY NAC domain 50 109 IPR036093 GO:0003677|GO:0006355
Lele50g1300 372 ProSiteProfiles NAC domain profile. 1 109 IPR003441 GO:0003677|GO:0006355
Lele50g1300 372 Gene3D NAC domain 35 114 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1300 Lele-ChrLele50 12235453 12237469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1300 50 169 NAC Transcription Factor Family AT5G39820 45.926 8.49e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele50g1300 NAM 5.6e-06 No_clan