Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1267 ATGTTGTTCGTGGAAATTTCGCTGGAAAATAAGTCCCTTTCTGGTGAGATTTTCCCATCAATTTTCGCTCTCCAAAACATCCGAGTTCTATCACTTGCATCAAATTTTATTTCTGGGAAGCTTCTATTTGAAGTAAGCAACTGCAGCAACCTTAGAGTTTTGAACCTAACAGAAAATGAGATGGTTGGGAGTTTGCCGGACTTGTCTCAGATGAGAAATCTAAAAGTTCTTGACCTTTCTGCAAACTACTTTTCCGGCAGATTCCCAAGCTGGGTTGGAAATCTGACTGGTCTAGTTTGGCTAGGGCTCGGGGAAAATGAATATATTGAGAGTGAAATTCCTGAGACTCTGGGCAATCTGAAGAACTTGACTTGGCTCTATCTTGGTGGTTCTCATTTGAGAGGTGAGATTCCAGAATCAATTTATGAAATGAAGGCTTTGGAGACACTGGATATTTCCAGAAACATGATCTCTGGGAAACTCTCTAAGTCTATTTGGAAGTTGACAAATCTTTGTAAGATTGAGCTTTTCTCAAATAATTTAACTGGGCAAATCCCAGATGAGCTGGCAAACTTGACAAAGCTTGAGGAGATTGACATTTCGATGAACCATATGTATGGTAAATTGCCAGAAGTGATTGGTACTATGAAGAATTTGGTTGTTTTTCAACTCTATGAAAACAACTTTACAGGAGAAATTCCTTTTGGTTTTGGAGATATGCAACATCTTGTTGGATTCTCAATTTATAGAAATGGCTTCTCCGGGAAAATTCCAGAAGATTTCGGCCGATTTTCACCTCTGGACAGCATTGATATATCAGAGAATCAATTTTCAGGCGATTTTCCAAAGTTCTTGTGTGAAAACAGAAATTTGAAATTTTTGCTTGCTTTGCAAAATAATTTCTCCGGTGCATTGCCTGAGACTTATGTTACATGTAAATCATTGGAGAGATTCAGGGTGAGCAGAAATCGCTTGTCTGGAAAAATTCCAAATGAGTTGTGGGCACTTCCAGTTGTAAAGATAATTGATTTGGCTGACAATAATTTTGAGGGTGATATATCTCCAAAAATGGTGCTTTCTTCTAGCTTAAGCCAATTAGTTCTAACAAAGAATAAGTTTTCGGGTAAGCTTCCTTCACAACTTGGGAAGCTGATGAATTTGGAGAAGCTATATTTGAGCAACAACAATTTCTATGGTGAAATACCAGCTGAAATTGGATCTCTGAAGCAATTATCATCTTTTCATCTAGAAGAGAATTCATTAACTGGATCAATACCTGTAGAACTTGGCAATTGTGCAAGGCTAGTGGACCTAAATATTGCTCGGAATTTTCTAACCGGAGCTATTCCTCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGCAACAATCTTACAGGCTCAATCCCAGAAAGCTTAGTGCCAATGAAATTGAGCTCAATTGATTTTTCCGAAAACCAGTTGTCTGGGAGAATTCCGAGCAATCTTCTAATTATTGGCGGTGATGAAGCTTTTGTTGAAAATCCAGGACTTTGTGTTGAACAAAATTCAAGAACTCTTATGAATTCTGAATTCAACATTTGTACAAGCATACATGGTCAGAAAAGGGTCTTCTCTGATAAGATAGTAATTCTCTGTGTGATCGCTTCTGTCTTGGTCATTGTGTTGGCCGTGTTGCTTGTGAGTTATGGAAGCTTCAAGCATGAAAAAGCAGACTTGGAGAAAAATTTGCAAGATCAAAAGGAAACAGATTCAAAATGGAAAATTGCTTCTTTCCACCAAGTTGATCTTGATGTGAATGAAATATGTCATTTGGATGAAGATAATTTGATTGGAACCGGTGGTACTGGAAAGGTATATCGCGTTGACTTGAAGAAAAATGGTTCCACGGTGGCCGTAAAACAACTATGGAAAGGAGATGGTGTGAAAATTTTGGCAGCAGAGATGGAGACTTTGGGAAAAATCAGGCATAGAAATATACTTAAGCTTTATGCTTGTTTGTTTAAAGGAGGATCAAACTATTTAGTGTTAGAGTACATGTCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAAGGTGGAAAACCAGAATTGGATTGGTACCAGAGATATAAATTTGCACTGGGTACTGCAAAAGGAATTGCATATTTACGTCATGGTTGTTCTCCACCTATCATTCACAGAGACATAAAATCTAGTAACATTTTGCTCGACGAGGATTATGCGGAGAAAACTGATCAACAGCTGGGTTTTAGCTGTCTTGCTGGTACTCTTGGTTATATTGCTCCTGGAAGGGAACCCATTGAAGAGGAATACGGCGAAGGGAAGGATATTGTATATTGGGTTATGACTAACCTCGATGACCGTGAGAGCGCGATCAAGATCCTCGATGATAAAATAGCATCGGAGTCCGTTGAAGACGAAGTGATTAAGGTCTTGAAAGTTGCTATCCGCTGCACAACTAAGCTCCCTTCTTTGCGCCCTATCATGAGAGATGTTGTCAAGATGCTTATTGATGCTTATTCTAGCCCTTTTCAACCTGCAGACAGCGATTTTGAGAAAGATGTTAAGGGTTTTATCTAA 2601 0.386 MLFVEISLENKSLSGEIFPSIFALQNIRVLSLASNFISGKLLFEVSNCSNLRVLNLTENEMVGSLPDLSQMRNLKVLDLSANYFSGRFPSWVGNLTGLVWLGLGENEYIESEIPETLGNLKNLTWLYLGGSHLRGEIPESIYEMKALETLDISRNMISGKLSKSIWKLTNLCKIELFSNNLTGQIPDELANLTKLEEIDISMNHMYGKLPEVIGTMKNLVVFQLYENNFTGEIPFGFGDMQHLVGFSIYRNGFSGKIPEDFGRFSPLDSIDISENQFSGDFPKFLCENRNLKFLLALQNNFSGALPETYVTCKSLERFRVSRNRLSGKIPNELWALPVVKIIDLADNNFEGDISPKMVLSSSLSQLVLTKNKFSGKLPSQLGKLMNLEKLYLSNNNFYGEIPAEIGSLKQLSSFHLEENSLTGSIPVELGNCARLVDLNIARNFLTGAIPQSVSLMSSLNSLNLSGNNLTGSIPESLVPMKLSSIDFSENQLSGRIPSNLLIIGGDEAFVENPGLCVEQNSRTLMNSEFNICTSIHGQKRVFSDKIVILCVIASVLVIVLAVLLVSYGSFKHEKADLEKNLQDQKETDSKWKIASFHQVDLDVNEICHLDEDNLIGTGGTGKVYRVDLKKNGSTVAVKQLWKGDGVKILAAEMETLGKIRHRNILKLYACLFKGGSNYLVLEYMSNGNLFQALHRQIKGGKPELDWYQRYKFALGTAKGIAYLRHGCSPPIIHRDIKSSNILLDEDYAEKTDQQLGFSCLAGTLGYIAPGREPIEEEYGEGKDIVYWVMTNLDDRESAIKILDDKIASESVEDEVIKVLKVAIRCTTKLPSLRPIMRDVVKMLIDAYSSPFQPADSDFEKDVKGFI 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1267 866 SMART serkin_6 609 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1267 866 Gene3D Ribonuclease Inhibitor 212 299 IPR032675 -
Lele50g1267 866 FunFam Leucine-rich receptor-like protein kinase family protein 599 683 - -
Lele50g1267 866 Gene3D Ribonuclease Inhibitor 3 108 IPR032675 -
Lele50g1267 866 FunFam Leucine-rich repeat receptor protein kinase EMS1 137 219 - -
Lele50g1267 866 SUPERFAMILY L domain-like 289 500 - -
Lele50g1267 866 SUPERFAMILY L domain-like 112 353 - -
Lele50g1267 866 Gene3D Ribonuclease Inhibitor 109 211 IPR032675 -
Lele50g1267 866 Pfam Leucine rich repeat 434 492 IPR001611 GO:0005515
Lele50g1267 866 Pfam Leucine rich repeat 72 133 IPR001611 GO:0005515
Lele50g1267 866 Gene3D Transferase(Phosphotransferase) domain 1 594 849 - -
Lele50g1267 866 Gene3D Ribonuclease Inhibitor 300 400 IPR032675 -
Lele50g1267 866 Gene3D Ribonuclease Inhibitor 401 524 IPR032675 -
Lele50g1267 866 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 18 110 - -
Lele50g1267 866 SUPERFAMILY L domain-like 4 160 - -
Lele50g1267 866 ProSiteProfiles Protein kinase domain profile. 609 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1267 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Lele50g1267 866 ProSitePatterns Protein kinases ATP-binding region signature. 615 638 IPR017441 GO:0005524
Lele50g1267 866 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 144 844 - -
Lele50g1267 866 FunFam Receptor-like protein kinase HSL1 220 525 - -
Lele50g1267 866 Coils Coil 567 587 - -
Lele50g1267 866 Pfam Protein kinase domain 611 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1267 866 SUPERFAMILY Protein kinase-like (PK-like) 607 843 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1267 Lele-ChrLele50 10144160 10148451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1267 4 846 Receptor kinase-like Gene Family AT1G72180 54.453 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele50g1267 Pkinase 4.1e-23 CL0016