Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1256 ATGCCAGTTTTATCTCCTGAGAATATGAAAGTTTTCTGGGTTTCTTTTATTTTCTTGTTCCCCGCGATCGTTGTTTCTCTGCTTGGTCAGATTTCAACGGCGCAATTAATCACAAGTGAGAGAATTCTTCTTCTCCAGGCCAAGAGGTTGCTTGAATATCCTCAGGTTCTTCAAGGATGGAGAAGATGGACCAGCTTCTGCTATCTCCCCCCTTCACCTTATGTCAAGATTGTCTGCTCCAACGGCCATGTGACAGAACTAACCATTGTTGGGAACAAGGTCTCGCCATCTTCCTCTCAAACTCTTTCAGAAAGATTCTCCATTGATTCTTTCTTCACTGTCTTGACGAAGCTATCAAGTTTGAAGGTACTGTCACTTGTGTCTCTAGGTTTGTGGGGTCCTTTACCTGCCAAGATAGGTAGGTTCTGGTCACTTGAAGTTTTGAACATTAGCTCAAATTCCATCTATGGTGAAATCCCAGCATCAATCCGTTCTGTAAAATACCTTAGGAATCTGAATTTGGCTGATAATTTGTTCAATGGCAGTGTTCCAGATCTGAAATCACTAGCTTTTCTTGAAGAACTTAATCTGGGCGGAAACAAACTGGGTTCTGAATTCCCTTCATTGGGGAACAATCTTGTGAGAATTATCCTGAAAAACAACTCCTTTAAGTTTCAGATTCCTTCCAGAATCATGTATTTTCACAAGCTTCAAGATTTTGACATCTCTTCCAATGAATTTTCTGGACCAATCCCACCTTCTCTGTTCTCTCTGCCTTCCATTGTGCACATAAACTTAGCTCAAAACCAACTCACTGGCGGATCCTCTGTGAACATAAACTGTAGTTCTAAGCTAACATTTGTGAATCTCTCAGACAACCTTTTAGTTGGAAAATTCCCACCGTGTTTTGGATCATCAAAATCCTCAAATCGCACTGTATTGTATTCTGGGAATTGCTTTTCAGCTAGAAGCTTAACGGGCAAGCATCAACATCCATCTTCATATTGTATGAAAGAGAAGGCCTTTGCTGTGAAGCCTGTGGAGAGAAGCCGAAAGAATGAGACAGGTATGAGAATTCTTTTGACGATTGGAGTTATTGGAGGTTCCGTTGGATTCGCTGTTCTTCTGTCACTGTCCATTGTGTTCACATGGAGGAAATGCAAAGAAGACAGAGCACATCATAAAGATTTAGATAGATCTAATGTTCATAAGCTCACAAGGCCAAATATTCATGCAAGATGTGTTCCTCAGACAATGAGGCTATGTGCACTTGGGCTCCCACCATACAGAATTTTCACATCAGAAGAAATTGAAGATGCAACGAACAACTTTGATCCATCAAATCTAATATCACAAGGATCTAAAGGAAAGACATATAAAGGTTGGCTCAGAGATGGTTCAGAGGTCCTTTTCAACTGTGTGGAAGTAACAGACAAGAACTTGATGAAACAACACACGGAGGTTTTACCCAATTTGAGGCACAGACATTTGGTAAGTGTGCTAGGACATTGTATCATTACTCCTCATCAAGACCATTCCCATCTAAGAAGCACAGTCTTCATTGTCCTTGAGCACTTCTCAAATGGCTCACTCAAGCATCATCTTTCAGATTTGAGAAAGAAGCAAGTGCTGAAATGGCCACAGAGAATGGTAATAAGCATAGGAATTGCAAGAGGGACACAGTTCTTGCACACAGGGGTTGTTCCTGGCATATTTGGCAACGATTTACAGATTGACAAAATTTTGCTTGATGATAATCTCAACCCAAAAGTCAGTGGATATAACATTCCATTGCCATACAAGCATGGTTTTGAGAGCACACTTCTTGAACAAAGTGGCCCCAATCATGTTGCAAGAATCGATACAACAGAAAAGGAAGATATCTATCAATTGGGTGTTATTCTTCTTGAAATCATTAGTGGCAAAAGACTTTCCTCTGCCAGGGAAATAGAGGATCTGAAGGATGAGCTGGAGAGAGGTTTATCAGAAGCAGCATCAACGCTAAGAAGTGCAATAGATCCATCCATTCAAGGAACTTACGCATATGAATCACTGAGGACTGCAATCCAAATCACAATCAACTGTTTGTGCAAAGTTCCCAGTAAGCGACCTTCAATAGAGGACGTTCTCTGGAACTTGCAGTATTCACTGCAAGTTCAAGAGTCATGGACCACCAGCAGTGGAAACCTTGGTACAAAGTTTTAG 2205 0.4104 MPVLSPENMKVFWVSFIFLFPAIVVSLLGQISTAQLITSERILLLQAKRLLEYPQVLQGWRRWTSFCYLPPSPYVKIVCSNGHVTELTIVGNKVSPSSSQTLSERFSIDSFFTVLTKLSSLKVLSLVSLGLWGPLPAKIGRFWSLEVLNISSNSIYGEIPASIRSVKYLRNLNLADNLFNGSVPDLKSLAFLEELNLGGNKLGSEFPSLGNNLVRIILKNNSFKFQIPSRIMYFHKLQDFDISSNEFSGPIPPSLFSLPSIVHINLAQNQLTGGSSVNINCSSKLTFVNLSDNLLVGKFPPCFGSSKSSNRTVLYSGNCFSARSLTGKHQHPSSYCMKEKAFAVKPVERSRKNETGMRILLTIGVIGGSVGFAVLLSLSIVFTWRKCKEDRAHHKDLDRSNVHKLTRPNIHARCVPQTMRLCALGLPPYRIFTSEEIEDATNNFDPSNLISQGSKGKTYKGWLRDGSEVLFNCVEVTDKNLMKQHTEVLPNLRHRHLVSVLGHCIITPHQDHSHLRSTVFIVLEHFSNGSLKHHLSDLRKKQVLKWPQRMVISIGIARGTQFLHTGVVPGIFGNDLQIDKILLDDNLNPKVSGYNIPLPYKHGFESTLLEQSGPNHVARIDTTEKEDIYQLGVILLEIISGKRLSSAREIEDLKDELERGLSEAASTLRSAIDPSIQGTYAYESLRTAIQITINCLCKVPSKRPSIEDVLWNLQYSLQVQESWTTSSGNLGTKF 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1256 734 ProSiteProfiles Protein kinase domain profile. 444 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1256 734 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 526 729 - -
Lele50g1256 734 Gene3D Transferase(Phosphotransferase) domain 1 526 728 - -
Lele50g1256 734 Gene3D Ribonuclease Inhibitor 37 210 IPR032675 -
Lele50g1256 734 SUPERFAMILY L domain-like 38 320 - -
Lele50g1256 734 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 37 211 - -
Lele50g1256 734 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 352 722 - -
Lele50g1256 734 Coils Coil 647 667 - -
Lele50g1256 734 Gene3D Ribonuclease Inhibitor 211 340 IPR032675 -
Lele50g1256 734 Pfam Protein kinase domain 448 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1256 734 SUPERFAMILY Protein kinase-like (PK-like) 424 713 IPR011009 -
Lele50g1256 734 Gene3D Phosphorylase Kinase; domain 1 414 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1256 Lele-ChrLele50 9772232 9777288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1256 53 732 Miscellaneous Gene Families AT3G03770 39.218 9.47e-168 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele50g1256 Pkinase 4.6e-14 CL0016