Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1246 ATGTGTAGACTCTACTTAAAGGTATCTAATTATAACAACGAGGTTGAGATTATGAGAACTATGACAAAAGAAGAATATCTTGCTTCTTTAAGAAGGAGAAGCAGTGGATTTTCCAGAGGAGTATCAAAGTACAGAGGAGTTGCAAGGCACCATCACAATGTAAGATGGGAAGCAAGAATGGGGGGAGTTTTTGGTAACAAGTACCTTCACCTTGGCACTTACATTGAAAGATGGATTCTGAAGAATGGTGATGTGGCAGGTACACAAGAAGAGGCTGCACGTGCATATGATATTGCAGCTATAGAATACAGAGGCTTGAATAGGAAAACTGTTCCCTCTTTCCTTCTTTTTTTTTTTTTTTTGACTTTCATTCCTTCCTTCTACTGCCACCCACACAGATAG 402 0.393 MCRLYLKVSNYNNEVEIMRTMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNVRWEARMGGVFGNKYLHLGTYIERWILKNGDVAGTQEEAARAYDIAAIEYRGLNRKTVPSFLLFFFFLTFIPSFYCHPHR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1246 133 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 110 - -
Lele50g1246 133 SUPERFAMILY DNA-binding domain 42 107 IPR016177 GO:0003677
Lele50g1246 133 ProSiteProfiles AP2/ERF domain profile. 43 115 IPR001471 GO:0003700|GO:0006355
Lele50g1246 133 Gene3D AP2/ERF domain 42 114 IPR036955 GO:0003700|GO:0006355
Lele50g1246 133 SMART rav1_2 43 121 IPR001471 GO:0003700|GO:0006355
Lele50g1246 133 CDD AP2 42 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1246 Lele-ChrLele50 9681270 9682964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1246 8 110 AP2-EREBP Transcription Factor Family AT5G57390 58.252 2.14e-34 122