Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1222 ATGAACGACGTCGTCGTAGACTACTACAAGATTCTGCAAGTGTCACGTGAAGCGAACGACGATGAATTGAAGAAGGCGTACAGAAAACTAGCCATGAAATGGCACCCGGATAAGAATAATCAAAGCCCTATTAAGATGAAAGAAGCAGAGGCAAAATTCAAACAGATATCAGAAGCTTATGAGGTTCTAGCTAACCCGGCGAAGCGAAAGAATTACGACGATGGCCAAACAAGTCCTCTGAATAACAATAACAATAATGATATCACTTCTAATACTAGGAAGCGAAAGACGTGGGATTTTGGTTCTCAATATCCTCTTAACTTGGAAAGGGTTGTTCTGAAGAATCCTGATGAACATATTGCAGTTCATAAGGCGAAAGGTATGAAATCTGCAGTTTCAGAACACAAACTTGTTTTAAGTTTGGAGGATCTTTACAAAGGATGCGAAAGAAGATTGAGAATCTCAAGGAGTGCTATTAATGCTCTTGGAAACATGATGATTGTTGATGAAATATTGGAGATAAACGTGAAGCCTGGTTGGAAGACGGACACAAGGATAACATTTCCTGGAAAAGGAAACCAAGTACTAGGAAGTCCTTGTCCTGCTGATCTGGTATTTGTGGTGAAAGAGAAACCTCATGCGATTTTCAAAAGGGAAGGAAATGATTTGGTGACAACTCAAAAGATATCACTTTTAGAGGCTCTCACTGGGAAAACAATCAAAGTTACAACGTTGGAAGGAAGAGAAATCCAAGTTTCTGTGACAGATATTGTGAAACCACTCACTGAGATTGTGATTGAAGACGAAGGCATGCCCTCGTCAAACAAATCAGGCCAAAAAGGAAACCTCAGAATTAAGTTTGATATCATCTTTCCATCATCGCAGTTTACTGAATCACAAAAGTGTGAACTCAAAAAGATTTTTAGTGAAGTTGATGATTAA 942 0.3896 MNDVVVDYYKILQVSREANDDELKKAYRKLAMKWHPDKNNQSPIKMKEAEAKFKQISEAYEVLANPAKRKNYDDGQTSPLNNNNNNDITSNTRKRKTWDFGSQYPLNLERVVLKNPDEHIAVHKAKGMKSAVSEHKLVLSLEDLYKGCERRLRISRSAINALGNMMIVDEILEINVKPGWKTDTRITFPGKGNQVLGSPCPADLVFVVKEKPHAIFKREGNDLVTTQKISLLEALTGKTIKVTTLEGREIQVSVTDIVKPLTEIVIEDEGMPSSNKSGQKGNLRIKFDIIFPSSQFTESQKCELKKIFSEVDD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1222 313 Gene3D DnaJ domain 5 111 IPR036869 -
Lele50g1222 313 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 308 - -
Lele50g1222 313 SMART dnaj_3 6 68 IPR001623 -
Lele50g1222 313 Gene3D - 132 211 - -
Lele50g1222 313 SUPERFAMILY HSP40/DnaJ peptide-binding domain 216 295 IPR008971 GO:0006457|GO:0051082
Lele50g1222 313 FunFam DnaJ subfamily B member 13 213 293 - -
Lele50g1222 313 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Lele50g1222 313 Pfam DnaJ C terminal domain 134 292 IPR002939 -
Lele50g1222 313 MobiDBLite consensus disorder prediction 69 92 - -
Lele50g1222 313 Gene3D - 213 293 - -
Lele50g1222 313 CDD DnaJ 7 63 IPR001623 -
Lele50g1222 313 CDD DnaJ_C 134 294 - -
Lele50g1222 313 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Lele50g1222 313 FunFam Dnaj homolog subfamily b member 129 211 - -
Lele50g1222 313 MobiDBLite consensus disorder prediction 71 92 - -
Lele50g1222 313 Pfam DnaJ domain 7 73 IPR001623 -
Lele50g1222 313 PRINTS DnaJ domain signature 9 27 IPR001623 -
Lele50g1222 313 PRINTS DnaJ domain signature 68 87 IPR001623 -
Lele50g1222 313 PRINTS DnaJ domain signature 48 68 IPR001623 -
Lele50g1222 313 PRINTS DnaJ domain signature 27 42 IPR001623 -
Lele50g1222 313 SUPERFAMILY Chaperone J-domain 6 87 IPR036869 -
Lele50g1222 313 SUPERFAMILY HSP40/DnaJ peptide-binding domain 134 213 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1222 Lele-ChrLele50 8991051 8992854 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1222 8 80 C2H2 Transcription Factor Family AT1G74250 37.838 1.79e-10 60.1