Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1206 ATGGATCCAGGAGCTATGCTGAAAGAGGATTCGTTTGCGAATGGGGGCCCTAATACGGCACCGTTTAACCTGGCGGATATCTGGCAATTTCCGATGAATGTCAGTGCGGGTCTCGGGGATTCTGGGGGTGGGTTGGGGCTGAGGAGGCCACAGTTCGGCCATAATTTGGGTCCGCCGCCGTTCGGTGATTTTCCGGGTCATACGAATCGGGATGTAACCGGTAATGATCAAATCAGCTCGGAGCAGAGAGGGAATAATAATAACAATAATAGGAAGCGTCGTGATTCCGAGGATGAGTCCACCAAGGGCGTCTCCACCAGTAATGGCGGCAATGGCGTGAATGATGGTGGTGAAGGAAAACGGCTTAAAGCTTCAGCGAATAGGAATGAGAGTCGGGAAACTAAAGCTGAAGCAGAGCCCAGTTCAGGAAAGCCTGCGGAGCAAAATAACCAGACACCTCCTCCTGAGCCTCCTAAGCAAGATTACATTCATGTTCGAGCAAGAAGAGGTCAAGCTACTGATAGTCACAGTCTAGCAGAAAGAGCTAGAAGGGAGAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATTGGGAAAGCACTGGTCCTTGATGAGATTATAAATTATATCCAATCACTACAGGGGCAGGTTGAGTTCCTGTCTATGAAACTTGAAGCTGTAAATTCAAGACTGAACCCTGGCGTCGAAGTCTTTCCTCCTAAAGATTTTGGCCAACAATCATTTGAAACAGCTGGCATGGTATTTGGCTCACAAGCTACAAGAGAGTATAGCCGGGGTTCATCGCCGGAGTGGTTACATATGCAGGTAGGTGGTGGTTTTGAAAGAACGTCTTAG 879 0.479 MDPGAMLKEDSFANGGPNTAPFNLADIWQFPMNVSAGLGDSGGGLGLRRPQFGHNLGPPPFGDFPGHTNRDVTGNDQISSEQRGNNNNNNRKRRDSEDESTKGVSTSNGGNGVNDGGEGKRLKASANRNESRETKAEAEPSSGKPAEQNNQTPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQGQVEFLSMKLEAVNSRLNPGVEVFPPKDFGQQSFETAGMVFGSQATREYSRGSSPEWLHMQVGGGFERTS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1206 292 MobiDBLite consensus disorder prediction 121 140 - -
Lele50g1206 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 221 IPR011598 GO:0046983
Lele50g1206 292 SMART finulus 177 227 IPR011598 GO:0046983
Lele50g1206 292 Pfam Helix-loop-helix DNA-binding domain 175 222 IPR011598 GO:0046983
Lele50g1206 292 CDD bHLH_AtBPE_like 161 246 - -
Lele50g1206 292 FunFam Basic helix-loop-helix transcription factor 168 240 - -
Lele50g1206 292 Coils Coil 218 238 - -
Lele50g1206 292 MobiDBLite consensus disorder prediction 35 161 - -
Lele50g1206 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 239 IPR036638 GO:0046983
Lele50g1206 292 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 75 262 IPR024097 GO:0006355
Lele50g1206 292 MobiDBLite consensus disorder prediction 87 101 - -
Lele50g1206 292 MobiDBLite consensus disorder prediction 70 86 - -
Lele50g1206 292 Gene3D - 168 242 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1206 Lele-ChrLele50 8416693 8418964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1206 1 271 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.480 6.17e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele50g1206 HLH 2.4e-08 No_clan