Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1200 ATGTCACCTGACGGCGACGTCATTACGTCTACTCCGGGAGCCTTCAGGCTCCGCTGGGACGTCTTCCTGAGCTTCAGAGGTGCGGATACTCGTCGTTGCTTCACCATACCCCTCTACAACGCCCTCCAATCTTGCGGCGTTCGGGTTTTCCTTGACGACGTAGGACTGGATCGCGGTGGAATTGCTGGTTTCCCTTTCTGGCATCCCAGTGAAAAGGAAAAGAGAGATGACCTGATTCGACTTTTAGTGAAAAGGATTCTGAGAGAGCTGAGCAATGCTCCGGTGGGCGTGGCTGAATTTACTGTTGGACTCGATGCTCGTATTGAAGACTTGTTGGAATTGTTAGACATGAGATCCAATGGTATAAGAGTGTTGGGATTGTATGGGATGGGTGGGATTGGTAAGACTACCCTTGCGAAGGCTCTTTTTAACAGACTTGTTGTGGATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCCAAAGATGGAGGCTTAATTTCTCTTAGAAGCAGAATTATCGGTGACATTTCCTCTCGAGAAGTGGTTGGTAACGATATTTCTGCATTCAGAAGAACAGTTAGTGAAAACCGTGCTCTGATAATTCTGGATGACGTGGATGATGTGAATCAGCTCAATACTCTAATTGGCAGAAGAGAATGGTTCCATGAGGGAAGCCGTATTGTAGTCACCTCAAGGGATACGCAAGCTTTGGCTGAGACTTATGTTAACGTCTGGTACGAGGTTCAGATATTGGATGACTCTCAATCACTAGAACTATTCTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGACAAAACTCTCTTGAAATTGTCGAAGGAAATAGTGTCTCGGACAGGAAGATTGCCTTTAGCTCTGGAAGTGTTTGGTTCAATGCTGTTTGGTAACAGAAGGGAAAATGAATGGGTTGATGCTGTGAAGAAGCTGAAACTGATTCGACCTGGGAATCTCCAGGATGTGTTGAAGATTAGTTATGAGGGTTTAGATAAACAAGAGCAAGGCATCTTCCTTGACATTGCTTGTTTGTTTGTTCAAATGAGCATGAAGCGAGAAGATGTGATTGATGTATTGAGATGTTGTAGATATGGGGGAGAGATGGCAATCACTGTTCTCACAGAGAAATGTTTGATCAAAATCAGAGAGGACGAAACCATTTGGATGCACGATCAAATTAGAGACATGGGAAGGCAAATTGTTGTGGATGAAAACTTTGTTGATCCTGGCATGCGTACTAGATTGTGGGATCGATCTGAAATTCTACTTGTTTTGAGGAATTTGAAGGGAACTCGGAGTATTCAAGGGATGGTCCTAGACTTCGAGAAAAGATCTGCCAAAGATTATAAAGCTGATGAAGCAATTTCTTGGAACAACCTTCAATGGGGTTCAAGTTTCGCAAGTGCCCTGGCATTCCTTAAACAGAGGCACAAGAAATATTTTCAACGAGTTGAGAAAGACAAAGAGGCTCTGGTGATTCACACCAAGTCCTTTGAATCAATGGTGAACTTGGTGCTGCTTCAGATCAATTATTTGAGATTGGAAGGGAAGTTCGAATCTTTCCCTGCAGAATTGAAGTGGCTACAATGGCAAGGATGTCCTTTAAAATCCATTCCTTCTGATTTTTGGCCCCCAGAATTGGCTGTCCTTGACCTCACAGACAGCAATGTTGAGAACTTGTGGGATCGGAAAGGCTACAAGGTGCCAGAGAAAATAATGGTCATGAATTTGTCCCATTGCTACAAACTAGAAACTCTTCCTGATCTCTCCAGGTGTCAACGTTTAGAGAAGATGGTACTTGAGAACTGCTTTAACCTAAGTAGGATTCATGAATCAGTGGGCAAATTGACAAGACTTCGTAATTTGAATCTGACTCGTTGTAGAGAACTTACTGAGTTACCCAATGATATATCTAGGCTGGAAAATCTAGAAAGCCTCTGTCTCTCTGACTGCGGGAAGTTGAAATCGTTACCAGAAAATATGGTCAACTTGAAATCACTGAGAAAACTTCTTGCTGACCGCACGGCGTTAGTAAAGCTTCCTGAGACTATTTTTCACCTTGAGAAACTTGAAACTCTTAGTTTAAATGGTTGCCATCATTTAAAAAGGCTACCCGACAACGTAGGACTCTTGTGTTCTCTGCAAGAGCTGTCTCTCGACCATTCTGGATTAGAAGAGCTACCCAATTCTGTCGGGCATTTGAAAAACCTTGAAATGCTTGGCTTGATGCATTGTGGATCTCTCACTAGGATTCCTGATTCTATTGGAAATCTCGTATCACTTTCAGAGCTTCGGCTTTTTGGTAGTTCTATTGGAGAGCTTCCATCTTCGATTGGATCATTGACTTATCTAAAAGAACTCTCAGTAGGAAATTGTATGTTTCTGAATAAATTGCCTGAGTCCATTAAGTCTTTGGTTTCCGTTGTTGAGCTTCAGCTAGATGGGGCAGCGATCACATATTTGCCAGATGAGATTGGAAATATGGCATTACTTAAAAAGCTTGAAATGAGGAATTGCCGGATGAGATATCTACCTAAATCGATTGGCAACCTCACAGCTCTTACAACCTGGAACATTTTCAAAGGTAACATTGTAGAACTGCCAGAATCCATTGGAAGGCTCGAGAATCTAGTCCATTTAAAGTTGGACCAATGTACAATGCTCAGAAGGCTTCCAAATTCTATAGGGCATTTGAAGTCCTTGTATCATCTTTTGATGGAGGAAACGGGTCTGACAGAATTACCTCCAAGCTTTGGCATGCTTACCAGCTTAAGGACGTTGAAAATGGCCAAGAAATCCGAAAATAACATGCTTCAAGATTCTTCTGTAATCTCATCTTTTTTCTGCAATTTGATATTTCTGAATGATCTGGATGCTCGTGGTTGGAGAATATCTGGAAAAATCCCTGATGATTTTGAGAAATTGTCCTCTTTAAAATCTTTGAATCTAAGCCAAAACAAATTTTACAGCCTTCCTTCCAGTATGGCCGGCCTTTCAGTTCTCAAGGAACTTTATCTTCAAAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGACGAAGCTGAATGCTGCAAACTGTTCTGCCTTACAAAGCATTCATGACCTTTCAAATTTAAAAAGTTTAAAGGATCTGAACCTCACAAATTGTGCAAAATTGGTGGACATTCCTGGCCTTGAACAGTTGGAGTCTCTAATGTGGCTGTACTTGGGTGGATGCCTTAAATGCTCGTCCACAGTCCGCAAGAGGCTTTCTAAGGTTACATTGAGGAATTTATTGAACTTGAGCATGCCAGGAACAAGATTACCCAAATGGTTTTCAGGACAAACTGTAAGCTTTCCAAAGCCCCAGAACGGTGAACTAACTGGTGTAATTATAGGTGTCATTCTTTCAATCAACCATGATATACCTAGTGAACTCCGAGATGTTCTTCCTGGAGTAGTTGATATCAAAATAGATGTCCTCAAACTCGGCAAAAATATATGTACTTCAGGATTGGACTTGCGTGGATTGCCAAGTACCAATGAAGAACACATGTACCTTTGCAGGTACCCAGATTATCATCATCTCTTCTCTTTTTTGAGAGATGGTGACACATTATGTGTGACTCGATTAAACCCACCTGTGGATAATGGGTTAGAGTTGAAAAAATGTGGGGTTCATTTGATCTTTAAAGGGGATGACGACTTTGGTGGAGATGAAGAATCTGTGGACCCAAGTTTACAATCTGTGTCAGAAAAATTGGCCAAGTTTTTCAACACTTGCGAAGAAGGTAGCTCCGAAGATGGAATTGAGGGTGAAGATGATGATGAGCGCCAAAAGCAATTAGGGACTCAGGAAAAGGAAGACAGAATCTCATCATCATCTATTCCCAGCAACTCCAATTTTCTATTATATTTTATTAGTCTGCTCGTTTTCTTTTTGAGCTGGCTGCTAATAAAATTTGTCTTTACCTATGATGTATAG 4002 0.417 MSPDGDVITSTPGAFRLRWDVFLSFRGADTRRCFTIPLYNALQSCGVRVFLDDVGLDRGGIAGFPFWHPSEKEKRDDLIRLLVKRILRELSNAPVGVAEFTVGLDARIEDLLELLDMRSNGIRVLGLYGMGGIGKTTLAKALFNRLVVDFEHRSFISSVREVSSKDGGLISLRSRIIGDISSREVVGNDISAFRRTVSENRALIILDDVDDVNQLNTLIGRREWFHEGSRIVVTSRDTQALAETYVNVWYEVQILDDSQSLELFCYHAMRRKEPADKTLLKLSKEIVSRTGRLPLALEVFGSMLFGNRRENEWVDAVKKLKLIRPGNLQDVLKISYEGLDKQEQGIFLDIACLFVQMSMKREDVIDVLRCCRYGGEMAITVLTEKCLIKIREDETIWMHDQIRDMGRQIVVDENFVDPGMRTRLWDRSEILLVLRNLKGTRSIQGMVLDFEKRSAKDYKADEAISWNNLQWGSSFASALAFLKQRHKKYFQRVEKDKEALVIHTKSFESMVNLVLLQINYLRLEGKFESFPAELKWLQWQGCPLKSIPSDFWPPELAVLDLTDSNVENLWDRKGYKVPEKIMVMNLSHCYKLETLPDLSRCQRLEKMVLENCFNLSRIHESVGKLTRLRNLNLTRCRELTELPNDISRLENLESLCLSDCGKLKSLPENMVNLKSLRKLLADRTALVKLPETIFHLEKLETLSLNGCHHLKRLPDNVGLLCSLQELSLDHSGLEELPNSVGHLKNLEMLGLMHCGSLTRIPDSIGNLVSLSELRLFGSSIGELPSSIGSLTYLKELSVGNCMFLNKLPESIKSLVSVVELQLDGAAITYLPDEIGNMALLKKLEMRNCRMRYLPKSIGNLTALTTWNIFKGNIVELPESIGRLENLVHLKLDQCTMLRRLPNSIGHLKSLYHLLMEETGLTELPPSFGMLTSLRTLKMAKKSENNMLQDSSVISSFFCNLIFLNDLDARGWRISGKIPDDFEKLSSLKSLNLSQNKFYSLPSSMAGLSVLKELYLQNCIELVSLPALPSSLTKLNAANCSALQSIHDLSNLKSLKDLNLTNCAKLVDIPGLEQLESLMWLYLGGCLKCSSTVRKRLSKVTLRNLLNLSMPGTRLPKWFSGQTVSFPKPQNGELTGVIIGVILSINHDIPSELRDVLPGVVDIKIDVLKLGKNICTSGLDLRGLPSTNEEHMYLCRYPDYHHLFSFLRDGDTLCVTRLNPPVDNGLELKKCGVHLIFKGDDDFGGDEESVDPSLQSVSEKLAKFFNTCEEGSSEDGIEGEDDDERQKQLGTQEKEDRISSSSIPSNSNFLLYFISLLVFFLSWLLIKFVFTYDV 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1200 1333 Gene3D - 17 63 IPR035897 -
Lele50g1200 1333 Gene3D - 79 248 IPR027417 -
Lele50g1200 1333 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 715 IPR044974 GO:0006952
Lele50g1200 1333 PRINTS Disease resistance protein signature 290 304 - -
Lele50g1200 1333 PRINTS Disease resistance protein signature 124 139 - -
Lele50g1200 1333 PRINTS Disease resistance protein signature 694 710 - -
Lele50g1200 1333 PRINTS Disease resistance protein signature 196 210 - -
Lele50g1200 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 350 IPR027417 -
Lele50g1200 1333 SUPERFAMILY L domain-like 805 1112 - -
Lele50g1200 1333 SUPERFAMILY L domain-like 398 831 - -
Lele50g1200 1333 MobiDBLite consensus disorder prediction 1269 1300 - -
Lele50g1200 1333 Gene3D - 254 340 IPR042197 -
Lele50g1200 1333 CDD AAA 102 237 - -
Lele50g1200 1333 Gene3D Ribonuclease Inhibitor 1032 1119 IPR032675 -
Lele50g1200 1333 Gene3D Ribonuclease Inhibitor 816 1031 IPR032675 -
Lele50g1200 1333 Gene3D Ribonuclease Inhibitor 497 707 IPR032675 -
Lele50g1200 1333 Gene3D Ribonuclease Inhibitor 708 804 IPR032675 -
Lele50g1200 1333 Pfam NB-ARC domain 107 322 IPR002182 GO:0043531
Lele50g1200 1333 Pfam TIR domain 19 61 IPR000157 GO:0007165
Lele50g1200 1333 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 60 IPR035897 -
Lele50g1200 1333 SMART LRR_typ_2 814 837 IPR003591 -
Lele50g1200 1333 SMART LRR_typ_2 625 649 IPR003591 -
Lele50g1200 1333 SMART LRR_typ_2 673 696 IPR003591 -
Lele50g1200 1333 SMART LRR_typ_2 720 743 IPR003591 -
Lele50g1200 1333 SMART LRR_typ_2 907 929 IPR003591 -
Lele50g1200 1333 SMART LRR_typ_2 767 790 IPR003591 -
Lele50g1200 1333 SMART LRR_typ_2 984 1007 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1200 Lele-ChrLele50 8303881 8310115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1200 643 945 WRKY Transcription Factor Family AT4G12020 29.653 5.40e-11 65.9