Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1196 ATGTCACAGGACGGCCACGTCGTGTTGTCGACTCCGGGAGCCTTCAGGCTACGCTGGGACGTCTTCCTAAGCTTCAGAGGTGCGGATACTCGTGATTGTCTCACCAAACCCCTCTACAACGCTCTCGAATCTCGCGGTATTCGAGTTTTCCTGGACGATGTTGGGTTGGATCGCGGTGACGAGATAGCCCCGAGTCTACTCGAAGCCATCGATGACTCGGCCGCTTCGATTATCATCATTTCTCCGGACTACGCTTCTTCTCATTGGTGTCTGGAGGAGCTTGCCAAGATTTGCGACTGCGGGAGGCTGATTCTGCCGGTGTTCTACCGCGTAAGCCCGACCGATGTCCTCGAACAAGCAGGTCCATTCGAAGATTCTTTCAAGGTTCATAAAGCCAAGAGGAGCGAAGATGAGGTAATCAGGTGGAGGAAAGCTATGAAGAAAGTAGGTGGAATTGCTGGTTGGATTTTCCAGAATCCCAGCCAAGAAGATAATCTAATTCGACTTTTAGTGAAAAGGATTCTTAAGGAACTAGGTAATACTCCGGTTGGTTTGGCTGAATTTACTGTTGGACTCAATGCTCGTATCGAAAAACTATTGGAATTGTTAGACATGAAATCAAGTGGCGTAAGAGTATTGGGATTGTTTGGGATGGGTGGGGTTGGTAAGACAACCCTTGCAAAGGCTCTTTTTAACAGACTCGTTGTGAATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGACAAGTTTCTTCGGAAGATGGAGGTTTAATTTCTCTAAGAAACAGAATTATCAGTGACATTTCCTCTCAAGCAGTTGTTGGTGATGATATCTCTGCTTTCAAAAGAACAGTTAATGAACATCGTGTTCTGATAATCCTGGATGATGTGGATGATCCGAAGCAGCTCGATGCTCTAATAGGAAAAAGAGAATGGTTCCATGAAGGCAGCCGTATTGTAGTCACCTCAAGGGATAAACGAGCTTTGCCTGAGACTCATGTTAATGTCCCCTACGAGGTTCAGATATTGGATGACTCTGATTCATTAGAACTATTCTGTTACCATGCAATGAGACGAAAGGAACCTGAGGACAAAACTCTTTTGAAATTGTCAAAGGAAATAGTTTCTCTAACAGGAAGATTGCCTTTAGCTGTGGAAGTGTTTGGTTCGTCGTTGTTTGGCAAGAAAAGGCAAGAGGAATGGGTTGTTGCTGTGGAGAAACTGAAGGCGATTCAACCTGGGAATCTTCAGGAAGTGTTGAAGATCAGTTATGAGGGGTTAGATGAACAAGAGAAATGCATCTTCCTTGACATAGCTTGTCTGTTCGTTCTGATGAGGATGAAGCGCGAAGATGTGATTGATGTACTTAGAGGTTGTAGATATGGGGGAGAGATAGCAATCACAGTTCTCACAGAGAAATGTTTGATCAAAATCAGAGAGGACGAAACCATTTGGATGCACGATCAAATTAGAGACATGGGAAGGCAAATTGTTGTGGAAGAAAACCTTGTCGATCCTGATATGCGTAGTAGATTGTGGGACAGATCTGAAATTCTAGGTGTTTTGAGGAATTTGAAGGGAACTCGGAGTATTCAAGGGATGGTACTAGACTTGGAGAAAATATCTACTAAAGATAACGGAGATGCAATTTCTTGGAACAAGCTTAAATGTGGTTCCAGTTTTAAGAATGCCCTGGCATTCCTTAAGCATATGCTCCAGAAATATTTTCAACGAGTTGAGAAAGACAAAGAGGTTGCAGTGCTTCAAACCAAGTCCTTTGAATCAATGGTGAACTTGGTGCTGCTTCAGATAAATAATTTGAGATTGGAAGGAAAGTTTAGATCTTTCCCTGCAGAATTGAAGTGGCTACAATGGCAAGGGTGTCCTTTAAAATCCATGCCTTCTGATTTTTGGCCACGAGAACTGGCTGTCCTTGATCTCACACACAGCAATATTGAGAATTTGTGGAATCGGAAAGGCGACAAGGTGCCTGAGAACCTCATGGTCATGAACCTCTCCGACTGCGACCACCTGGAGGCTCTTCCTGATCTGTCTGGATGCCAACGTTTAGAGAAGATTGTTCTAGTGAACTGCATTAAACTGAGTAGGATTCAAGAATCAGTTGGCAATCTGATCACACTTCGTCATTTGAATCTGACTCGTTGTACAGAACTTACTGAGTTACCGAATGATATATCTGGGCTGAAAAATCTAGAGAGCCTCTATCTCTCTGACTGCTACAAGTTCAAATCGTTACCAAGGAACATGGCCAACATGAAATCTCTAAGAAAGCTTCTAGCTAATGGCACGGCTTTAGCAGAGCTGCCCGAGACAATTTTTCGCCTTGAGAAACTTGAAATTCTTGTTTTAAATGATTGCCAAAATTTAAAAAAACTACCCAACAACATCGGACTTTTGTGTTCTCTGCAAGAACTTTCTATTAACCAATCTGGATTAGAAGAACTACCCAATTCTATTGGGTGTTTGAAGAACCTTGAGAAGCTTGGCTTGATGCATTGCTTTTCTCTTACTGAGATTCCTGATTCTATTGGAAACCTTGATTCACTTTCAGAGCTTATGCTTTCTGGCAGTGCTATTAGAGAGCTTCCGTCTTCGATTGGATCATTGTCTTATCTAAATGAACTCTGTGTAGGACACTGTAAGTCTCTGAAAAAGTTGCCTGAGTCCATTAAGCTTTTGGCTTCCGTTGTTGAGCTTCAGCTAGATGGGACAGCGATCACAGATTTGCCAGATGAGATTGGGGGTATGGAGTTGCTGAAAAAGCTTGAAATGAGGAATTGCCTGATGAGATCTCTACCCGAATCGATTGGACGCCTCGCAGCACTTACAAGCTTGGACATTTCCAATGGAAACATAGAAGAATTGCCAGAGTCCATGAAGGAGATAAGAAATCTTGTTCATTTAAGGTTGGACAAATGCAAAATGCTCAGAAAGCTTCCTGATTCTATAGGATCTTGGAAGTCCTTGTATCATCTTAGGATGGAGGAAACGGGTCTGACAGAATTACCTGAAAGCTTTGGTATGCTTACCAACTTAAGGACGTTGAAAATGGCCAATAAGTCTGAAAATAACTTGCTTCAGGAGTCTTCTGTAATCTCATTTCTTTTCTGCAATATGCTATTTCTGAATGACCTGGACGCTCGTTGTTGGAGAATATCTGGAAAAATTCCTGATGAATTTGGGAACTTGTCGTCTTTGGAGACTTTGAATCTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTTTGGCTGGCCTTTCATTTCTCAAAAAACTCTCTCTTCAAAACTGCATTGAGCTGGTTTCTCTCCCTGCTCTTCCATCAAGCTTGATAGAGCTGAATGCTGCAAACTGTTGCACCTTACAAAGCATTCATGACCTCTCAAATTTAACGAGTCTGAAGGATCTAAACCTCACGAATTGTGTAAAAGTAATGGATATTCCAGGTCTTGAACGGCTGGAGTCTTTGAGGAGTTTGTACTTGGGTGGATGCATTGCTTGCTCCTCCACAATCCGCAAGAGATTTTCTAAGGTTACAATGAGGAATTTAAGGAACTTGAGCATGCCAGGAACCAGATTACCCAGATGGTTTTCAGGACAAGCTGTCAGCTTTTCAAAGCCCCAGAACCGTAACCTAACTGGTGTAATTATAGGTATCATTCTTTCTATCAACCATGATACACCTAATGATGAACTGCGAGCTGATCAACTTCCAGGAGTAGCTGATATCAAAGCAAATGTCCTCAAACTGGGCAAAACTATATATAGTTCAGTGTTGGACTTGCGTGGGTTGCCAAGAACGAATGATGAACACATATACTTTTGTAGATTCCCAGATTATCATCATCTCATATCTTGCTTGCGAGATGATGGGGACACATTTTCTGTGACTAAGAAAAGCCCACCATCGGATAAGAGATTAGAGCTGAAGAAATGTGGGGTTCATTTGATGTTTGAAGGAGATGATGACGATTATGACGGAGATGAAGAATCTGTGGATAGAAGCCTACAATCTGTGTCAGAAAAGCTGGCTAAGTTTTTCAACACTAACGAAGAAGGTAGCCCCATAGATGATATTGAGAGTGAAGATGAAGAGAGAATATCATCATTCTCGAAGTGGATTATCTCCTGTTTCTAG 4158 0.4228 MSQDGHVVLSTPGAFRLRWDVFLSFRGADTRDCLTKPLYNALESRGIRVFLDDVGLDRGDEIAPSLLEAIDDSAASIIIISPDYASSHWCLEELAKICDCGRLILPVFYRVSPTDVLEQAGPFEDSFKVHKAKRSEDEVIRWRKAMKKVGGIAGWIFQNPSQEDNLIRLLVKRILKELGNTPVGLAEFTVGLNARIEKLLELLDMKSSGVRVLGLFGMGGVGKTTLAKALFNRLVVNFEHRSFISSVRQVSSEDGGLISLRNRIISDISSQAVVGDDISAFKRTVNEHRVLIILDDVDDPKQLDALIGKREWFHEGSRIVVTSRDKRALPETHVNVPYEVQILDDSDSLELFCYHAMRRKEPEDKTLLKLSKEIVSLTGRLPLAVEVFGSSLFGKKRQEEWVVAVEKLKAIQPGNLQEVLKISYEGLDEQEKCIFLDIACLFVLMRMKREDVIDVLRGCRYGGEIAITVLTEKCLIKIREDETIWMHDQIRDMGRQIVVEENLVDPDMRSRLWDRSEILGVLRNLKGTRSIQGMVLDLEKISTKDNGDAISWNKLKCGSSFKNALAFLKHMLQKYFQRVEKDKEVAVLQTKSFESMVNLVLLQINNLRLEGKFRSFPAELKWLQWQGCPLKSMPSDFWPRELAVLDLTHSNIENLWNRKGDKVPENLMVMNLSDCDHLEALPDLSGCQRLEKIVLVNCIKLSRIQESVGNLITLRHLNLTRCTELTELPNDISGLKNLESLYLSDCYKFKSLPRNMANMKSLRKLLANGTALAELPETIFRLEKLEILVLNDCQNLKKLPNNIGLLCSLQELSINQSGLEELPNSIGCLKNLEKLGLMHCFSLTEIPDSIGNLDSLSELMLSGSAIRELPSSIGSLSYLNELCVGHCKSLKKLPESIKLLASVVELQLDGTAITDLPDEIGGMELLKKLEMRNCLMRSLPESIGRLAALTSLDISNGNIEELPESMKEIRNLVHLRLDKCKMLRKLPDSIGSWKSLYHLRMEETGLTELPESFGMLTNLRTLKMANKSENNLLQESSVISFLFCNMLFLNDLDARCWRISGKIPDEFGNLSSLETLNLSQNKFHSLPSSLAGLSFLKKLSLQNCIELVSLPALPSSLIELNAANCCTLQSIHDLSNLTSLKDLNLTNCVKVMDIPGLERLESLRSLYLGGCIACSSTIRKRFSKVTMRNLRNLSMPGTRLPRWFSGQAVSFSKPQNRNLTGVIIGIILSINHDTPNDELRADQLPGVADIKANVLKLGKTIYSSVLDLRGLPRTNDEHIYFCRFPDYHHLISCLRDDGDTFSVTKKSPPSDKRLELKKCGVHLMFEGDDDDYDGDEESVDRSLQSVSEKLAKFFNTNEEGSPIDDIESEDEERISSFSKWIISCF 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1196 1385 ProSiteProfiles Leucine-rich repeat profile. 1072 1094 IPR001611 GO:0005515
Lele50g1196 1385 Gene3D - 17 178 IPR035897 -
Lele50g1196 1385 Gene3D Ribonuclease Inhibitor 888 1222 IPR032675 -
Lele50g1196 1385 Gene3D - 342 428 IPR042197 -
Lele50g1196 1385 Pfam TIR domain 19 181 IPR000157 GO:0007165
Lele50g1196 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 438 IPR027417 -
Lele50g1196 1385 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Lele50g1196 1385 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 802 IPR044974 GO:0006952
Lele50g1196 1385 Gene3D Ribonuclease Inhibitor 568 887 IPR032675 -
Lele50g1196 1385 Pfam NB-ARC domain 195 418 IPR002182 GO:0043531
Lele50g1196 1385 Gene3D - 179 337 IPR027417 -
Lele50g1196 1385 SUPERFAMILY L domain-like 890 1201 - -
Lele50g1196 1385 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 180 - -
Lele50g1196 1385 SMART LRR_typ_2 1070 1093 IPR003591 -
Lele50g1196 1385 SMART LRR_typ_2 759 782 IPR003591 -
Lele50g1196 1385 SMART LRR_typ_2 853 876 IPR003591 -
Lele50g1196 1385 SMART LRR_typ_2 946 968 IPR003591 -
Lele50g1196 1385 SMART LRR_typ_2 900 923 IPR003591 -
Lele50g1196 1385 SMART LRR_typ_2 735 758 IPR003591 -
Lele50g1196 1385 SMART LRR_typ_2 806 829 IPR003591 -
Lele50g1196 1385 PRINTS Disease resistance protein signature 212 227 - -
Lele50g1196 1385 PRINTS Disease resistance protein signature 378 392 - -
Lele50g1196 1385 PRINTS Disease resistance protein signature 780 796 - -
Lele50g1196 1385 PRINTS Disease resistance protein signature 284 298 - -
Lele50g1196 1385 SUPERFAMILY L domain-like 485 917 - -
Lele50g1196 1385 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Lele50g1196 1385 SMART till_3 18 152 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1196 Lele-ChrLele50 8272313 8279357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1196 19 882 WRKY Transcription Factor Family AT4G12020 29.630 2.01e-77 281