Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1195 ATGTCACCGGACGGCGACGTCATTACTTCTACTCCGGGAGCCTTCAGGCTCCGCTGGGACGTCTTTCTGAGCTTCACAGGTGCGGATACTCGTCGTTGCTTCACCATACCCCTCTACAACGCCCTCCAATCTTGCGGCGTTCGGGTTTTCCTTGACGACGTAGGACTGGATCGCGGAGCTCGCCAAGATTTGGAACTGCAGGTGTTCTTCAACGTCGATCCGCGTGATGTTCGGAAGCAAGAGGGTCCATTCAGAAAATATTTCAAGAAACACGAAGCCAAGAGGAGTGAAGAAGAGGTAAGCAGATGGAGAAAAGCTATGAAGAAAGTAGGTGGAATTGCTGGTTTCCCTTTCTGGCATCCCAGTGAAAAGGAAAAGAGAGATGACCTGATTCGACTTTTAGTGAAAAGGATTCTGAGAGAACTGAGCAATGCTCCGGTGGGCGTGGCTGAATTTACTGTTGGACTCGATTCTCGTATTGAAAACTTGTTGGAATTGTTAGACATGAGATCCAATGGCATAAGAGTGTTTGGATTGTATGGGATGGGCGGGATTGGTAAGACTACCCTCGCGAAGGCTCTTTTTAACAGACTTGTTGTGGATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCCAAAGATGGAGGCTTAATTTCTCTTAGAAGCAGAATTATCGGTGACATTTCCTCTCGAGAAGTGGTTGGTAACGATATTTCTGCATTCAGAAAAACAGTTAGTGAAAACCGTGCTCTGATAATTCTGGATTATAGCGATGATGTGAATCAGCTCGATACTCTAATTGGCAGAAGAGAATGGTTCCATGAAGGAAGCCGTATTGTAGTCACCTCAAGCGATACGCAAGCTTTGGCTGATACATATGTTAATGTCATGTACGAGGTTCAGATATTGGATGACTCTCAATCACTAGAACTATTCTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGACAAAACTCTCTTGAAATTGTCGAAGGAAATAGTGTCTCGGACAGGAAGATTGCCTTTAGCTCTGGAAGTGTTTGGTTCAATGCTGTTTGGTAACAGAAGGGAAAATGAATGGGTTGATGCTGTGAAGAAGCTGAAACTGATTCGACCTGGGAATCTCCAGGATGTGTTGAAGATTAGTTATGAAGGTTTAGATAAACAAGAGCAAGGCATCTTCCTTGACATTGCTTGTTTGTTTGTTCAAATGAGCATGAAGCTAGAAGATGTGATTGGTGTATTGAGATGTTGTAGATATGGGGGAGAGATGGCAATAACTGTTCTCACACAGAGATGTTTGATCAAAATCAGAGAGGACGAAACCATTTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATTGTTGTGGATGAAAACTTTGTTGATCCTGGTATGCGTACTAGATTGTGGGATCGATCTGAAATTCTACTTGTTTTGAGGAATTTGAAGATCAATTATTTGAGATTGGAAGGGAAGTTCGAATCTTTCCCTGCAGAACTGAAGTGGCTACAATGGCAAGGATGCACTTTAAAGTCCATTCCTTCTGATTTTTGGCCCCCAGAATTGGCTGTCCTTGACCTCACACACAGCAATGTTGAGAACTTGTGGGATCAGAAAGGCTACAAGGTGCCAGAGAAAATAATGGTCATGAATTTGTCCCATTGTTATAAACTAGAAACTCTTCCTGATCTCTCCAGGTGTCAACGTTTAGAGAAGATTGTACTTGAGAACTGCTTTAACCTAAGTAGGATTCATGAATCGGTTGTAAAGCTTCCTGAGGCTATTTTTCACCTTGAGAAACTTGAAACTCTTAGTTTAAATGGTTGCCGTCATTTAAAAAGGCTACCCGACAATGTAGGACTCTTGTGTTCTCTGCAAGAGCTGTCTCTCGACCATTCTGGATTAGAAGAACTACCCAATTCTGTCGGGCATTTGAAAAACCTCGAAATGCTTGGCTTGACGCATTGTGGATCTCTCACTAGGATTCCTGATTCTATTGGAAATCTCGTATCACTTTCAGAGCTTCGGCTTTTTGGTAGTTCTATTGGAGAGCTTCCATCTTCGATTGGATCATTGACTTATCTAAAAGAACTCTCAGTAGGAAATTGTAAGTTTCTGAATAAATTGCCTGAGTCCATTAAGTCTTTGGTTTCCATTGTTGAGCTTCAGCTAGATGGAGCAGCGATCGCATATTTGCCAGATGAGATTGGAAATATGGCATTACTTAAAAAGCTTGAAATGAGGAATTGCCGGATGAGATATCTACCTAAATCGATTGGCAACCTCACAGCTCTTACAACCTGGAATATTTTCAAAGGTAACATTGTAGAACTGCCAGAATCCGTTGGAAGGCTCGAAAATTTAGTCCATTTAAAGTTGGACCAATGCACAATGCTCAGAAGGCTTCCAAATTCTATAGGGCATTTGAAGTCCTTGTATCATCTTTTGATGGAGGAAACGGGTCTGACAGAATTACCTCGAAGCTTTGGCATGCTTACCAGCTTAAGGACGTTGAAAATGGCCAAGAAATCCGAAAATAACATGCTTCAAGATTCTTTTGTAATCTCATCTTTTTTCTGCAATTTGATATTTCTGAATGATCTGGATGCTCGTGGTTGGAGAATATCTGGGAAAATCCCTGACGATTTTGAGAAATTGTCCTCTTTAAAAACTTTGAATCTGAGCCAAAACAAATTTTACAGCCTTCCTTCCAGTATGGCGGGCCTTTCAGTTCTCAAGGAACTTTATCTTCAAAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGACGAATCTGAAAGCTGCAAACTGTTGTGCCTTACAAAGCATTCATGACCTTTCAAATTTAACATGTTTAAAGGATCTGAACCTCACAAATTGTGCAAAATTGGTGGACATTCCTGGCCTTGAACAGTTGGAGTCTCTAATGTGGCTGTACTTGGGTGGATGCCTTAAATGCTCGTCCACAGTCCGCAAGAGGCTTTCTAAGGTTACACTGAGGAATTTGTTGAACTTGAGCATGCCAGGAACAAGATTACCCAAATGGTTTTCAGGACAAACTGTAAGCTTTCCAAAGCCCCAGAACGGTGAACTAACTGGTGTAATTATAGGTCTCATTCTTTCAATCAACCACGATATACCTAGTGAACACCGGTATGTCCTTCCTGGAGTAGTTGATATCAAAATAGATGTCCTCAAACTCGGCAAAAATATATGTACTTCAGGATTGGACTTGCGGGGATTGCCAAGCACCAATGAAGAACGCATATACCTTTGCAGGTACCCAGATTACCATCATCTCTCCTCTTTTTTGAGAGATGGTGACACATTATGTGTGACTCGGTTAAACCCACCTGTGGATAAGGGGTTAGAGTTGAAAAAATGTGGGATTCATTTGATCTTTAAAGGGGACGACGACTTTGGTGGAGATGAAGAATCTGTGGACCCAAGTTTACAATCTGTGTCAGAAAAATTGGCTAAGTTTTTCAACACTTGCGAAGAAGGTAGCTCCGAAGATGGAATTGAGGGTGAAGATGATGATGAGTGCTAA 3582 0.4202 MSPDGDVITSTPGAFRLRWDVFLSFTGADTRRCFTIPLYNALQSCGVRVFLDDVGLDRGARQDLELQVFFNVDPRDVRKQEGPFRKYFKKHEAKRSEEEVSRWRKAMKKVGGIAGFPFWHPSEKEKRDDLIRLLVKRILRELSNAPVGVAEFTVGLDSRIENLLELLDMRSNGIRVFGLYGMGGIGKTTLAKALFNRLVVDFEHRSFISSVREVSSKDGGLISLRSRIIGDISSREVVGNDISAFRKTVSENRALIILDYSDDVNQLDTLIGRREWFHEGSRIVVTSSDTQALADTYVNVMYEVQILDDSQSLELFCYHAMRRKEPADKTLLKLSKEIVSRTGRLPLALEVFGSMLFGNRRENEWVDAVKKLKLIRPGNLQDVLKISYEGLDKQEQGIFLDIACLFVQMSMKLEDVIGVLRCCRYGGEMAITVLTQRCLIKIREDETIWMHDQIRDMGRQIVVDENFVDPGMRTRLWDRSEILLVLRNLKINYLRLEGKFESFPAELKWLQWQGCTLKSIPSDFWPPELAVLDLTHSNVENLWDQKGYKVPEKIMVMNLSHCYKLETLPDLSRCQRLEKIVLENCFNLSRIHESVVKLPEAIFHLEKLETLSLNGCRHLKRLPDNVGLLCSLQELSLDHSGLEELPNSVGHLKNLEMLGLTHCGSLTRIPDSIGNLVSLSELRLFGSSIGELPSSIGSLTYLKELSVGNCKFLNKLPESIKSLVSIVELQLDGAAIAYLPDEIGNMALLKKLEMRNCRMRYLPKSIGNLTALTTWNIFKGNIVELPESVGRLENLVHLKLDQCTMLRRLPNSIGHLKSLYHLLMEETGLTELPRSFGMLTSLRTLKMAKKSENNMLQDSFVISSFFCNLIFLNDLDARGWRISGKIPDDFEKLSSLKTLNLSQNKFYSLPSSMAGLSVLKELYLQNCIELVSLPALPSSLTNLKAANCCALQSIHDLSNLTCLKDLNLTNCAKLVDIPGLEQLESLMWLYLGGCLKCSSTVRKRLSKVTLRNLLNLSMPGTRLPKWFSGQTVSFPKPQNGELTGVIIGLILSINHDIPSEHRYVLPGVVDIKIDVLKLGKNICTSGLDLRGLPSTNEERIYLCRYPDYHHLSSFLRDGDTLCVTRLNPPVDKGLELKKCGIHLIFKGDDDFGGDEESVDPSLQSVSEKLAKFFNTCEEGSSEDGIEGEDDDEC 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1195 1193 Gene3D - 306 392 IPR042197 -
Lele50g1195 1193 SUPERFAMILY L domain-like 447 762 - -
Lele50g1195 1193 Pfam NB-ARC domain 159 374 IPR002182 GO:0043531
Lele50g1195 1193 Gene3D Ribonuclease Inhibitor 733 1036 IPR032675 -
Lele50g1195 1193 Gene3D - 64 140 IPR035897 -
Lele50g1195 1193 Gene3D Ribonuclease Inhibitor 597 732 IPR032675 -
Lele50g1195 1193 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 629 IPR044974 GO:0006952
Lele50g1195 1193 PRINTS Disease resistance protein signature 176 191 - -
Lele50g1195 1193 PRINTS Disease resistance protein signature 248 262 - -
Lele50g1195 1193 PRINTS Disease resistance protein signature 603 619 - -
Lele50g1195 1193 PRINTS Disease resistance protein signature 342 356 - -
Lele50g1195 1193 ProSiteProfiles Leucine-rich repeat profile. 895 916 IPR001611 GO:0005515
Lele50g1195 1193 SMART LRR_typ_2 629 652 IPR003591 -
Lele50g1195 1193 SMART LRR_typ_2 816 838 IPR003591 -
Lele50g1195 1193 SMART LRR_typ_2 893 916 IPR003591 -
Lele50g1195 1193 SMART LRR_typ_2 723 746 IPR003591 -
Lele50g1195 1193 SMART LRR_typ_2 676 699 IPR003591 -
Lele50g1195 1193 Gene3D Ribonuclease Inhibitor 474 596 IPR032675 -
Lele50g1195 1193 Pfam TIR domain 67 144 IPR000157 GO:0007165
Lele50g1195 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 402 IPR027417 -
Lele50g1195 1193 Gene3D - 141 300 IPR027417 -
Lele50g1195 1193 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 116 IPR035897 -
Lele50g1195 1193 SMART till_3 18 113 IPR000157 GO:0007165
Lele50g1195 1193 Gene3D - 16 63 IPR035897 -
Lele50g1195 1193 SUPERFAMILY L domain-like 721 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1195 Lele-ChrLele50 8251073 8256943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1195 68 705 WRKY Transcription Factor Family AT4G12020 28.005 2.69e-58 219