Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1193 ATGGCTTCTTCTTCTTCTTCCTCCACCTCCACCTCCTCCTCCAACGTGAAGCCATGGCTTTGTTTAAGCTTTATCTTCGTTCTTCAAACTTCTCTCCTCGCACCAACCTGTAATTGTCAGCCTCAGAACATCGAAACCTTCTTTCCAAATGAAACTCCACCCACAGCTCCTCCACCGAGCATTTCTCCATCGCCGCCGGTTGTCCCCCCGCCGGCGCCGGCGGAAACAACCAGAAGTTCTTCATCATCGAATAGTAAGATAGGGAAGGCGGTGGCGATTACTGCAGCAAGCACTGTGGTTGTTTCTGCGTTAGTCTTCTTCTTTATACGGTCGTGTTTAAAGAAAAGACGCAGAGAAGAGAGACGGGTGAGCTCGGCTTCGGAACCTGGTGACGGAAATGGAAGAGACGTTGTAACTCAGACGAACGCGTTTGAGAGAATTGAAGGGAATGTGAAGGGATTGATTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAGGGAGCTTCAAGAGAAGAAGAATAGCTCCAAGAAGGGATTACAGAGAGAGGTTCGAACCATCGCTAAAGAACAAGATCAGCAAGAACAAGAAGTAGAAGAAGTTGACGATGATGGTGATAATGAACGAAATCATCGCCGGAAAAAACCTGAGCCTGTTCAAGAAATCCCTCTGCTTCGTGGCAAGTCTTCGGCTTCCGAGAAGAATTTAATAGCAGAAGATGAACATGGGTCGGGTCGGAGTTGGAGTTGGAGGAGAACGTTTTCTCGAAAAACAGCCCCTAATCCTCCTCCTCCGGTGACGACGGCGGCAACAACTGTTTCACCGCCATTACCACCACCCCCCGCCGCGTATTTTTCTGCTGTTTCAAAAGCAAAAAACGTGGAACCGCCGCCGCCGCCTCACGTTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGTTTCACCACCATTGCCGCCACCACCCTCTGCTTACTTTTCTTCTGTTAACAAGACGAAAAGCCCTGAACCACCACCTCCTCCTCCGTCAATTCCAGATAAGAAGGGTCCAGCGCCGCCTCCCCCGCCTCCACCTGTGCCAGCTAAAAAGAGTCCTGCAGCAGCACCACCTGCTCCTCCCATGGCAGGAAAAAACTTGAGGTCATCTTCAAAACCACCACCAACCCCAGTTGAAATTTCAGGGGAAGACAATGATAAAGTGAAACTCAAGCCTTTACATTGGGATAAAGTCACCACTAACGTTGATCATTCCATGGTTTGGGACAAATTGGATCGTGGCTCATTCAGGGTTGATCAAGATCTTATGGAAGCTCTTTTTGGATATGTGGCAACAAGCAAAAGAACACCAAGAGGGAAAGGCAATTCAACTAGTCCAACCAAGGAGGCATCTTCTGTAGCACAATCAAGCGCAACTTTCATTCTTGAATCCAGGAAATCACAGAACATTGCTATTGTTTTGAGATCTCTAGCCGTGTCGCGCCGGGAAATCCTCGACGCCCTCGACGAGGGCCACGGCTTAAATTCGGATATAATTGAGAAGCTTGTTAGAGTTGCTCCAACACAAGAAGAACAATCTGAAATCATTGATTATAATGGAGACCCTGCAAAACTTGCTGTTGCAGAATCCTTCCTTTATGACATTCTCAAAGCTGTTCCTTCAGCTTTCAAGCGTTTGAATGCTATGCTTTTCAGGTTCAATTATGATTCAGAGATATTAGAGATCAAGGAATCTATGAACACCCTTGAATTAGGCTGCAAGGAGCTTCGAAATCGAGGGCTTTTCATTAAACTCCTCGAAGCGGTTCTTAAGGCCGGGAACCGTATGAATGCTGGTACTTCAAGAGGCAATGCTCAAGCTTTCAACTTGACTTCTTTGAGGAAGCTCTCTGATGTGAAAAGCACAGATGGGAAAACCACGTTGCTTCACTTTGTGGTCGAAGAAGTAGTCCGATCCGAGGGAAAACGGTGCGTTCTTAACCGCGATCGAAGCCTGAATCGCAGTGGAAGTAGTAGTAGGAGGAGGAGAATGAACTCTGAGAATGAGAACTCTGTTTCAGGTGAACAGAGAGAAATGGAATACCTGAAGTTAGGGTTACCATTTGTTGGAGGAATCAGCGCTGAGTTCTCCAATGTGAAGAAATCCGCCATTATAGATTACAATAGTTTAGTTTCTTCAATCTCATCACTTTCAACTCGGATAGCAGAAATCAAACAACTTGTTTCAAAGTGTAGTGAGAATGGTAATAATAAAGGAGAGAACTTTGTGAGAGAAATGGAGCATTTTCTGAGAAATGCGGAGGAAGAATTGAGATCAGTGAGAGATGAACAAACAAGGGTAATGCAGATTGTGAAGAAAACAACAGAGTATTATCAAGGAGGAGCGTTTAAAGATAAAGCAGAGAATCTTCTGGAAATATTTGTCATTGTTAAGGATTTTCTGGGTATGGTTGATCAGGCTTGTATTGATATTGCTCGTAGTATGCAGAAGAAAAAGAAGACAACAAAATCAAATTCTGGAGAACATACCAGAGTTGCTTCCCAGCAAGATTACTGCTCTGCTGCAAAACTCATTGCGGCAGAGCTTTCACAGGGTGATGCAGAATTTTTTTTTGGACCATATGCTATGGAACCAGAGAAAGGATGA 2652 0.451 MASSSSSSTSTSSSNVKPWLCLSFIFVLQTSLLAPTCNCQPQNIETFFPNETPPTAPPPSISPSPPVVPPPAPAETTRSSSSSNSKIGKAVAITAASTVVVSALVFFFIRSCLKKRRREERRVSSASEPGDGNGRDVVTQTNAFERIEGNVKGLIVDENGLDVIYWRELQEKKNSSKKGLQREVRTIAKEQDQQEQEVEEVDDDGDNERNHRRKKPEPVQEIPLLRGKSSASEKNLIAEDEHGSGRSWSWRRTFSRKTAPNPPPPVTTAATTVSPPLPPPPAAYFSAVSKAKNVEPPPPPHVASSSSSSSSSSSSSVSPPLPPPPSAYFSSVNKTKSPEPPPPPPSIPDKKGPAPPPPPPPVPAKKSPAAAPPAPPMAGKNLRSSSKPPPTPVEISGEDNDKVKLKPLHWDKVTTNVDHSMVWDKLDRGSFRVDQDLMEALFGYVATSKRTPRGKGNSTSPTKEASSVAQSSATFILESRKSQNIAIVLRSLAVSRREILDALDEGHGLNSDIIEKLVRVAPTQEEQSEIIDYNGDPAKLAVAESFLYDILKAVPSAFKRLNAMLFRFNYDSEILEIKESMNTLELGCKELRNRGLFIKLLEAVLKAGNRMNAGTSRGNAQAFNLTSLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRCVLNRDRSLNRSGSSSRRRRMNSENENSVSGEQREMEYLKLGLPFVGGISAEFSNVKKSAIIDYNSLVSSISSLSTRIAEIKQLVSKCSENGNNKGENFVREMEHFLRNAEEELRSVRDEQTRVMQIVKKTTEYYQGGAFKDKAENLLEIFVIVKDFLGMVDQACIDIARSMQKKKKTTKSNSGEHTRVASQQDYCSAAKLIAAELSQGDAEFFFGPYAMEPEKG 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1193 883 MobiDBLite consensus disorder prediction 233 247 - -
Lele50g1193 883 MobiDBLite consensus disorder prediction 175 400 - -
Lele50g1193 883 Coils Coil 177 204 - -
Lele50g1193 883 Coils Coil 758 785 - -
Lele50g1193 883 MobiDBLite consensus disorder prediction 48 86 - -
Lele50g1193 883 MobiDBLite consensus disorder prediction 258 283 - -
Lele50g1193 883 MobiDBLite consensus disorder prediction 336 375 - -
Lele50g1193 883 MobiDBLite consensus disorder prediction 119 138 - -
Lele50g1193 883 Pfam Formin Homology 2 Domain 399 819 IPR015425 -
Lele50g1193 883 SMART it6_source 395 834 IPR015425 -
Lele50g1193 883 MobiDBLite consensus disorder prediction 175 194 - -
Lele50g1193 883 ProSiteProfiles Formin homology-2 (FH2) domain profile. 395 845 IPR015425 -
Lele50g1193 883 MobiDBLite consensus disorder prediction 51 73 - -
Lele50g1193 883 Gene3D Formin, FH2 domain 416 853 IPR042201 -
Lele50g1193 883 SUPERFAMILY Formin homology 2 domain (FH2 domain) 474 840 - -
Lele50g1193 883 MobiDBLite consensus disorder prediction 205 221 - -
Lele50g1193 883 PANTHER FORMIN-RELATED 306 834 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele50g1193 883 MobiDBLite consensus disorder prediction 663 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1193 Lele-ChrLele50 8212096 8215194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1193 18 834 FH2 protein (formin) Gene Family AT1G70140 43.556 0.0 563