Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1164 ATGACTTTTCGCTCCCTCTTGTTCCTTCTCTTCTGCCTTGCATTTCTTCCATTGATTCAATCCGAGCTCGACATTAACTACTACCATAAAACATGCCCGAATTTCAAGGCAACAGTCCAGAGAATAGTAGCAGACAAGCAGCAAACGACGCCGACCACGGCCGCCGCCGCCCTCCGCCTCTTCTTCCAAGATTGCATGTTAGAAGGCTGCGACGCCTCCGTTCTGGTCTCCAGCAACTTCTTGAACACCGCCGAGCGCGACGCCGATATCAACCTCTCCCTCCACGGCGATGGCTTCGACGTGGTAGCTCGTGCTAAGAACGCCCTCGAGCTGGAATGCCCAGGCGTCGTCTCCTGCGCAGACATCCTCGCGGAGGCGGCGCGTGACCTCGTCGTCATCGTAGGCGGGCCCTCTTACGAGGTCCGATTGGGCCGAAGAGACGGATTGGAATCAAAAGCAAAAGACGTAGAAGGAAAATACCCAAAACCAATAATGTCATTATCCCAAGTCATCTCAATCTTCGAATCGAAGGGATTCTCCGTACAAGAAATGGTCGCGTTATCGGGTGCTCACACCATAGGATTCTCTCACTGCAACCAATTCAGCTACAGGATTTTCAATTTCAGCAAGAACTCACCCATCGATCCGGCGATGAACAACCAATACGTAGAAGGATTGAAGAAATTGTGCGAGAATGCAAGCAAAGATCCATCAATGAGCGCCTTCAACGACGTGATGACGCCGAGGAAGTTCGACAACATGTATTATCGGAATCTGCAGAGAGGATTAGGGTTGCTGGCGACGGATACGGCGTTGTGGCTGGACCAGAGGACGAAACCGTTCGTGGATCAATACGCATCGGATCAGAACAAGTTCTTCCAAGATTTTGCTAATGCGATGATCAAGCTTAGCAATCTGGACATCAAGACGGGGAACCAAGGAGAGATTCGTCAGAGATGCGATAATTTCAATTCGCTGCAACTTTGA 987 0.5066 MTFRSLLFLLFCLAFLPLIQSELDINYYHKTCPNFKATVQRIVADKQQTTPTTAAAALRLFFQDCMLEGCDASVLVSSNFLNTAERDADINLSLHGDGFDVVARAKNALELECPGVVSCADILAEAARDLVVIVGGPSYEVRLGRRDGLESKAKDVEGKYPKPIMSLSQVISIFESKGFSVQEMVALSGAHTIGFSHCNQFSYRIFNFSKNSPIDPAMNNQYVEGLKKLCENASKDPSMSAFNDVMTPRKFDNMYYRNLQRGLGLLATDTALWLDQRTKPFVDQYASDQNKFFQDFANAMIKLSNLDIKTGNQGEIRQRCDNFNSLQL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1164 328 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PANTHER - 6 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 CDD secretory_peroxidase 22 321 IPR033905 GO:0004601|GO:0042744
Lele50g1164 328 Pfam Peroxidase 39 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele50g1164 328 FunFam Peroxidase 161 303 - -
Lele50g1164 328 Gene3D Peroxidase, domain 2 161 303 - -
Lele50g1164 328 FunFam Peroxidase 26 168 - -
Lele50g1164 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Lele50g1164 328 Gene3D - 26 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1164 Lele-ChrLele50 7928665 7929651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1164 9 328 Peroxidase AT5G47000 55.864 1.08e-130 374