Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1158 ATGGAAGAACATCTCAGTCCACTTGCTGTTACTCATCTCCTTCAACACACTCTCAGAAGCTTGTGCATTCATGAAAATTCCCAATGGGTTTATGCTGTCTTCTGGAGGATCTTGCCCAGAAACTACCCTCCACCCAAGTGGGAAGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGATTTTGGTGTGGGAAGATGGTTTCTGCAACTTTGCTGCTTCATCAGCACCTGAAATCACCTCCGGCGGGGAATGCCCGGCGGCGGCTGGTTCGTCGGTTTACGGCAACTGTGAATTCCAGCACTACCAAGGACTTCAACCAGAGCTTTTCTTCAAGATGTCGCATGAGATCTATAACTATGGAGAAGGGTTGATTGGAAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAACCAAATGATCAAGAAATCAACTTCTTGTCAGCGTGGCACAATTCAGCAGACTCGCACCCAAGGACGTGGGAAGCCCAGTTCCAGTCTGGTATAAAGACCATAGCCCTCATCGCCGTAAGAGAAGGTGTTGTTCAACTAGGAGCCGTTCACAAGGTGATTGAAGACTTGAGCTACGTGGTACTTCTGAGGAAAAAGTTCGGCTACATTGAGAGTATCCCAGGCGTGCTGTTACCTCACCCATCATCTTCTGCATACCCTTACAAGGTTGAAGGTTACGGATCAATCCCTGAACAATGGCAATATTTCCAAGCAAGTCCTCTCATCGCGGCGCCACCACCACTACCGGAGCTATATGACCACTTCAGCCAGCAGCCTCTGAAAATCACTCCTTCAATGAGCAGCCTTGAAGCTCTTCTCTCTAAGCTTCCTTCTGTTGTACCTCCACCACCACCAACAACAGCAACAACACGTGAACCAGATCATCCTCATCCTCATCATCATCATTATCATCACCATCAAAGGCCCTTGGAGTTCATGGGAATGCAAAAAGCAGCAAAAGAAGAGATTGATAATGATCAGGAGGTTTATAGGCCAGAGCTTGATGTTGGTGAGAGCAGCAGTTCCATACCAGAAGGATACAGCCATCATCATCAGCAGCAGCAGCATCATTTCCAAGATCAGAATTTGACAAGTAATGGAGCCAATCATGGGTTTTGA 1146 0.4695 MEEHLSPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASSAPEITSGGECPAAAGSSVYGNCEFQHYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFGYIESIPGVLLPHPSSSAYPYKVEGYGSIPEQWQYFQASPLIAAPPPLPELYDHFSQQPLKITPSMSSLEALLSKLPSVVPPPPPTTATTREPDHPHPHHHHYHHHQRPLEFMGMQKAAKEEIDNDQEVYRPELDVGESSSSIPEGYSHHHQQQQHHFQDQNLTSNGANHGF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1158 381 MobiDBLite consensus disorder prediction 285 317 - -
Lele50g1158 381 MobiDBLite consensus disorder prediction 366 381 - -
Lele50g1158 381 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 209 IPR025610 -
Lele50g1158 381 MobiDBLite consensus disorder prediction 286 300 - -
Lele50g1158 381 MobiDBLite consensus disorder prediction 344 381 - -
Lele50g1158 381 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1158 Lele-ChrLele50 7809034 7811329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1158 13 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 28.169 1.37e-15 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1158 50 7809034 7811329 Lele50g1158 50 7809034 7811329 ECH
Lele50g1158 50 7809034 7811329 Lele51g1084 51 7021421 7023645 hybridization
Lele50g1158 50 7809034 7811329 Lele52g1122 52 7672460 7674777 hybridization