Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1129 ATGGAGATGCAACCTCTTCCGATATTCCCAAAGGGCTACCCAAACCGTTGGGAGAACAACACCACCATGGTCTCCGGCCTACCTCCAGAATTCGTCCGACGACGACCTTATGAGATGACACATGACATGCCGGAGAATGGTGTGTATCCGCAGACTCCAACAATGCCCGTTGAGCATCTAGTGGAGCCACCACAAAATAATCATGTAGAGCCAAATAAAGGCTTTTGGACTGCAACAGAACACAGGCTATTCTTGGAAGGACTGGAGAAATATGGAAAGGGAGCTTGGTCGAGTATTTCCAAATATATAGGGACAAGAACATATACCCAAGTAACTAGTCATGCTCAGAAACACTTCTTGCGCCAAAGTGATAATAAGAAAAAGAGAAACCGAGCAAGCATTCATGATATGACTATTGCAGACCTCGACCCTAGAACTCGAGATCAAAATTACTACCGGCAAAATATTGCTTCGAGTGCTCCAATATTATCAGCGCATCAATCTCAATTTTACTATCAGAATGCTTCGAATGATCAATTTCTTGGCTTTGAAAATCCAAACACTGTATACCTCTCTAATCCAGAGACTCTTACAAACCTCAACCCCATACTTCAAGATCAAGATTACTACCAGCAAAATATTGATTCGAGTCTTCCAATATTGCCAGCGGATCAATCTCAATTTGACCATCAGAATGTTTGGAATGATCAATCCCTTAGCTTGGGATATCCAAACACCATATATCTCTCTAATCCAGCGACTCCTGCAAACCTCAACCCTATTGCTTCAAATCCTCCAATGTTATCAGCACACCAATCTCAATTTGACTATCAGAATTCTTGGAATGATCAATCCATTGGCTTTGGAGATCCAAACAACATATACTTCTCTAATCCAAATACTCTTGCAAATCTCAACCCCATACCTCAGGATCAGTACTATAATCAGCAAAATATTCATTTGAGTCCTCCGATATTGTCAGCTCATCAATCTCAACCTACATACAACCCTTAG 1014 0.4142 MEMQPLPIFPKGYPNRWENNTTMVSGLPPEFVRRRPYEMTHDMPENGVYPQTPTMPVEHLVEPPQNNHVEPNKGFWTATEHRLFLEGLEKYGKGAWSSISKYIGTRTYTQVTSHAQKHFLRQSDNKKKRNRASIHDMTIADLDPRTRDQNYYRQNIASSAPILSAHQSQFYYQNASNDQFLGFENPNTVYLSNPETLTNLNPILQDQDYYQQNIDSSLPILPADQSQFDHQNVWNDQSLSLGYPNTIYLSNPATPANLNPIASNPPMLSAHQSQFDYQNSWNDQSIGFGDPNNIYFSNPNTLANLNPIPQDQYYNQQNIHLSPPILSAHQSQPTYNP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1129 337 Gene3D - 76 124 - -
Lele50g1129 337 Pfam Myb-like DNA-binding domain 74 118 IPR001005 -
Lele50g1129 337 ProSiteProfiles Myb-like domain profile. 68 119 IPR001005 -
Lele50g1129 337 SUPERFAMILY Homeodomain-like 72 123 IPR009057 -
Lele50g1129 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 75 122 IPR006447 GO:0003677
Lele50g1129 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 123 IPR017930 -
Lele50g1129 337 CDD SANT 76 119 IPR001005 -
Lele50g1129 337 PANTHER TRANSCRIPTION FACTOR KUA1 66 233 - -
Lele50g1129 337 ProSiteProfiles SANT domain profile. 76 123 IPR017884 -
Lele50g1129 337 SMART sant 72 121 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1129 Lele-ChrLele50 7446324 7447803 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele50g1129 Myb_DNA-binding 4.2e-11 CL0123